RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 MAN2B1O00754 1011 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 TBX3O15119 743 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 LYPLA2O95372 231 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 CHRNB1P11230 501 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 RPS6KB1P23443 525 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 PMLP29590 882 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 CCR2P41597 374 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 SATB1Q01826 763 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 CYP4A11Q02928 519 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 SRSF5Q13243 272 aaKnown RBP11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 TFDP1Q14186 410 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 GRM2Q14416 872 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 BMP2KLQ5H9B9 411 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 WDR44Q5JSH3 913 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 PDXDC1Q6P996 788 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 PPP4R3CPQ6ZMV5 832 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 TCEAL4Q96EI5 215 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 CHAMP1Q96JM3 812 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 JAKMIP1Q96N16 626 aaKnown RBP11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 IER2Q9BTL4 223 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 SLKQ9H2G2 1235 aaPredicted RBP11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 FZD8Q9H461 694 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 LMAN1LQ9HAT1 526 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 NDRG2Q9UN36 371 aaKnown RBP11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 BACE2Q9Y5Z0 518 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 CDY1Q9Y6F8 540 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 NCANO14594 1321 aa11.82□□□□□ -0.52
TM9SF1-210ENST00000530563 FREM2Q5SZK8 3169 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 TMEM189-UBE2V1I3L0A0 370 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 K7ESF4 209 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 ARNTLO00327 626 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 MOSPD3O75425 235 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 MICAL2O94851 1124 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 ABLIM3O94929 683 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 THP07101 528 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 HOXC13P31276 330 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 CCR3P51677 355 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 SHC2P98077 582 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 ELAVL2Q12926 359 aaKnown RBP11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 EARS2Q5JPH6 523 aaKnown RBP11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 GALNT17Q6IS24 598 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 BLOC1S2Q6QNY1 142 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 KRT25Q7Z3Z0 450 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 SKAP1Q86WV1 359 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 TPH2Q8IWU9 490 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 FAM177A1Q8N128 213 aaPredicted RBP11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 C3orf58Q8NDZ4 430 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 ZSWIM3Q96MP5 696 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 ASB16Q96NS5 453 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 PDZD7Q9H5P4 517 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 ZNF334Q9HCZ1 680 aaPredicted RBP11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 C2orf42Q9NWW7 574 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 SNTG2Q9NY99 539 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 RAB23Q9ULC3 237 aa11.81□□□□□ -0.52
TM9SF1-210ENST00000530563 PKD1L2Q7Z442 2459 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 A0A087WWV3 80 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 CHURC1-FNTBB4DL54 471 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 DGAT1O75907 488 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 PAPSS2O95340 614 aaPredicted RBP11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 DEXIO95424 95 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 EDN1P05305 212 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 GCFC2P16383 781 aaKnown RBP11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 PTPN2P17706 415 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 TKTP29401 623 aaKnown RBP11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 HSPA4P34932 840 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 CXCL12P48061 93 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 FNTBP49356 437 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 RARRES1P49788 294 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 SSRP1Q08945 709 aaKnown RBP11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 TOB2Q14106 344 aaPredicted RBP11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 SIM2Q14190 667 aaPredicted RBP11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 FAM187BQ17R55 369 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 N4BP2L1Q5TBK1 243 aaPredicted RBP11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 CDCA2Q69YH5 1023 aaPredicted RBP11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 NCAPH2Q6IBW4 605 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 SLC8B1Q6J4K2 584 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 VITQ6UXI7 678 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 PRR23BQ6ZRT6 265 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 NEK8Q86SG6 692 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 POTEDQ86YR6 584 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 FAM3CQ92520 227 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 DDX27Q96GQ7 796 aaKnown RBP11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 PRIMPOLQ96LW4 560 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 PPP1R10Q96QC0 940 aaKnown RBP11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 TRMT61BQ9BVS5 477 aaKnown RBP11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 BRD9Q9H8M2 597 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 ANKEF1Q9NU02 776 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 ANGPTL2Q9UKU9 493 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 KCNJ14Q9UNX9 436 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 USP20Q9Y2K6 914 aa11.8□□□□□ -0.52
TM9SF1-210ENST00000530563 WDR27A2RRH5 827 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 RECQL4O94761 1208 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 SEC24AO95486 1093 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 VIPR2P41587 438 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 RBM25P49756 843 aaKnown RBP11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 CLCNKBP51801 687 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 LIMK1P53667 647 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 MLLT6P55198 1093 aaPredicted RBP11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 ROR1Q01973 937 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms