RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 RPS9P46781 194 aaKnown RBP12.52□□□□□ -0.41
SF3B2-208ENST00000529994 POU5F1BQ06416 359 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 ADCY1Q08828 1119 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 SPIRE1Q08AE8 756 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 PPM1JQ5JR12 505 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 PPP4R3AQ6IN85 833 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 GALNT17Q6IS24 598 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 PRR23BQ6ZRT6 265 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 CCDC83Q8IWF9 413 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 NSUN7Q8NE18 718 aaKnown RBP12.52□□□□□ -0.41
SF3B2-208ENST00000529994 WASF1Q92558 559 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 CCDC43Q96MW1 224 aaKnown RBP12.52□□□□□ -0.41
SF3B2-208ENST00000529994 POLR3FQ9H1D9 316 aaPredicted RBP12.52□□□□□ -0.41
SF3B2-208ENST00000529994 RAB23Q9ULC3 237 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 KCNH3Q9ULD8 1083 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 USP20Q9Y2K6 914 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 MRPS17Q9Y2R5 130 aaKnown RBP12.52□□□□□ -0.41
SF3B2-208ENST00000529994 CDY1Q9Y6F8 540 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 CNOT1A5YKK6 2376 aaKnown RBP12.51□□□□□ -0.41
SF3B2-208ENST00000529994 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.51□□□□□ -0.41
SF3B2-208ENST00000529994 FAM205CA6NFA0 338 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 LRRIQ4A6NIV6 560 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 NRG2O14511 850 aaPredicted RBP12.51□□□□□ -0.41
SF3B2-208ENST00000529994 ECI2O75521 394 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 DGAT1O75907 488 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 THP07101 528 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 RHOP08100 348 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 FDPSP14324 419 aaKnown RBP12.51□□□□□ -0.41
SF3B2-208ENST00000529994 GCFC2P16383 781 aaKnown RBP12.51□□□□□ -0.41
SF3B2-208ENST00000529994 KRT2P35908 639 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 GUCY1B3Q02153 619 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 NR5A1Q13285 461 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 RAB33AQ14088 237 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 TMEM132AQ24JP5 1023 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 UVSSAQ2YD98 709 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 EIF2AK1Q9BQI3 630 aaKnown RBP12.51□□□□□ -0.41
SF3B2-208ENST00000529994 BRD9Q9H8M2 597 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 BRMS1Q9HCU9 246 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 GPRC5CQ9NQ84 441 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 SDK1Q7Z5N4 2213 aa12.51□□□□□ -0.41
SF3B2-208ENST00000529994 I3L4J1 428 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 TBX3O15119 743 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 USO1O60763 962 aaKnown RBP12.5□□□□□ -0.41
SF3B2-208ENST00000529994 RECQL4O94761 1208 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 TDGF1P13385 188 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 LIG1P18858 919 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 ST3GAL1Q11201 340 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 ELAVL2Q12926 359 aaKnown RBP12.5□□□□□ -0.41
SF3B2-208ENST00000529994 TRIM29Q14134 588 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 NAB2Q15742 525 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 EARS2Q5JPH6 523 aaKnown RBP12.5□□□□□ -0.41
SF3B2-208ENST00000529994 PDXDC1Q6P996 788 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.5□□□□□ -0.41
SF3B2-208ENST00000529994 NOSTRINQ8IVI9 506 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 PIGOQ8TEQ8 1089 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 TCEAL4Q96EI5 215 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 NFKBIZQ9BYH8 718 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 FAM126AQ9BYI3 521 aaPredicted RBP12.5□□□□□ -0.41
SF3B2-208ENST00000529994 CHRDQ9H2X0 955 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 PDZD7Q9H5P4 517 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 GDE1Q9NZC3 331 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 MTRRQ9UBK8 725 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 GDAQ9Y2T3 454 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 ZMYM2Q9UBW7 1377 aa12.5□□□□□ -0.41
SF3B2-208ENST00000529994 SLC30A4O14863 429 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 GDF9O60383 454 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 B3GAT3O94766 335 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 BAG4O95429 457 aaKnown RBP12.49□□□□□ -0.41
SF3B2-208ENST00000529994 POU2F2P09086 479 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 FGFR3P22607 806 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 TKTP29401 623 aaKnown RBP12.49□□□□□ -0.41
SF3B2-208ENST00000529994 RARRES1P49788 294 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 NRLP54845 237 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 SRSF5Q13243 272 aaKnown RBP12.49□□□□□ -0.41
SF3B2-208ENST00000529994 FAM78AQ5JUQ0 283 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 GLRA4Q5JXX5 417 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 LAIR1Q6GTX8 287 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 SLFN12Q8IYM2 578 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 FAM177A1Q8N128 213 aaPredicted RBP12.49□□□□□ -0.41
SF3B2-208ENST00000529994 ZNF687Q8N1G0 1237 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 NETO1Q8TDF5 533 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 ELSPBP1Q96BH3 223 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 HSD17B14Q9BPX1 270 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 CORO1BQ9BR76 489 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 LMAN1LQ9HAT1 526 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 ANKEF1Q9NU02 776 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 PRMT7Q9NVM4 692 aaPredicted RBP12.49□□□□□ -0.41
SF3B2-208ENST00000529994 RALYQ9UKM9 306 aaKnown RBP12.49□□□□□ -0.41
SF3B2-208ENST00000529994 LIMCH1Q9UPQ0 1083 aa12.49□□□□□ -0.41
SF3B2-208ENST00000529994 COL4A2P08572 1712 aa12.48□□□□□ -0.41
SF3B2-208ENST00000529994 MAN2B1O00754 1011 aa12.48□□□□□ -0.41
SF3B2-208ENST00000529994 N4BP3O15049 544 aa12.48□□□□□ -0.41
SF3B2-208ENST00000529994 LRG1P02750 347 aa12.48□□□□□ -0.41
SF3B2-208ENST00000529994 PTPN2P17706 415 aa12.48□□□□□ -0.41
SF3B2-208ENST00000529994 ATP2B1P20020 1258 aa12.48□□□□□ -0.41
SF3B2-208ENST00000529994 FCARP24071 287 aa12.48□□□□□ -0.41
SF3B2-208ENST00000529994 BRCC3P46736 316 aa12.48□□□□□ -0.41
SF3B2-208ENST00000529994 CLCNKBP51801 687 aa12.48□□□□□ -0.41
SF3B2-208ENST00000529994 ARPP19P56211 112 aa12.48□□□□□ -0.41
SF3B2-208ENST00000529994 SATB1Q01826 763 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms