RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	ARPP19	P56211	112 aa		12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	PFKP	Q01813	784 aa		12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	PRKCQ	Q04759	706 aa		12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	CSTF1	Q05048	431 aa	Known RBP	12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ECM1	Q16610	540 aa		12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	UPP1	Q16831	310 aa		12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	DCAF4L1	Q3SXM0	396 aa		12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	PABPC1L	Q4VXU2	614 aa	Known RBP	12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ATF7IP2	Q5U623	682 aa		12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	CD300LG	Q6UXG3	332 aa		12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	RUBCN	Q92622	972 aa		12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	PPP1R10	Q96QC0	940 aa	Known RBP	12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	PLA2G2F	Q9BZM2	168 aa		12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	MTRR	Q9UBK8	725 aa		12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	KCNH3	Q9ULD8	1083 aa		12.51	□□□□□ -0.41
PTP4A2-211	ENST00000528840	SMIM28	A0A1B0GU29	152 aa		12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	CCDC169	A6NNP5	214 aa		12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	LAMTOR5	O43504	91 aa		12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	OR52Z1	P0C646	297 aa		12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	PTPN2	P17706	415 aa		12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ELF1	P32519	619 aa		12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	CCT6A	P40227	531 aa	Known RBP	12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	RBM25	P49756	843 aa	Known RBP	12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	EFNA5	P52803	228 aa		12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	OSTN	P61366	133 aa		12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ANKS3	Q6ZW76	656 aa		12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	NPAS3	Q8IXF0	933 aa		12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	DDX23	Q9BUQ8	820 aa	Known RBP	12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	BHMT2	Q9H2M3	363 aa		12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	GOLGA2P5	Q9HBQ8	144 aa		12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	KIAA1024	Q9UPX6	916 aa		12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	BACE2	Q9Y5Z0	518 aa		12.5	□□□□□ -0.41
PTP4A2-211	ENST00000528840	RIF1	Q5UIP0	2472 aa	Known RBP	12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	FAM186A	A6NE01	2351 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	TMEM189-UBE2V1	I3L0A0	370 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	PRRG1	O14668	218 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	KIN	O60870	393 aa	Known RBP	12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	RHO	P08100	348 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	POU2F2	P09086	479 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	YARS	P54577	528 aa	Known RBP	12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ZBTB41	Q5SVQ8	909 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	TANGO2	Q6ICL3	276 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	RTL10	Q7L3V2	364 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	DGLUCY	Q7Z3D6	616 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	SUMF1	Q8NBK3	374 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ZNF461	Q8TAF7	563 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ATRIP	Q8WXE1	791 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	KIFAP3	Q92845	792 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	DDX27	Q96GQ7	796 aa	Known RBP	12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	C8orf76	Q96K31	380 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	UROC1	Q96N76	676 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	NELL2	Q99435	816 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	TCHP	Q9BT92	498 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	OSBPL6	Q9BZF3	934 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	FBXO4	Q9UKT5	387 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	TNFSF13B	Q9Y275	285 aa		12.49	□□□□□ -0.41
PTP4A2-211	ENST00000528840	NCAM2	O15394	837 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ECI2	O75521	394 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	LRG1	P02750	347 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	PEX3	P56589	373 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	SOX4	Q06945	474 aa	Predicted RBP	12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ST3GAL1	Q11201	340 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	PUM1	Q14671	1186 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	SLC5A9	Q2M3M2	681 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	TTC38	Q5R3I4	469 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	VARS2	Q5ST30	1063 aa	Known RBP	12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ALKAL1	Q6UXT8	129 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	TPRG1	Q6ZUI0	275 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	CEP120	Q8N960	986 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	C3orf58	Q8NDZ4	430 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ACO2	Q99798	780 aa	Known RBP	12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	CORO1B	Q9BR76	489 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	CCDC94	Q9BW85	323 aa	Predicted RBP	12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	CYP4F11	Q9HBI6	524 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	LTB4R2	Q9NPC1	389 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	DDX19A	Q9NUU7	478 aa	Known RBP	12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	GDE1	Q9NZC3	331 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	LRWD1	Q9UFC0	647 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	DMD	P11532	3685 aa		12.48	□□□□□ -0.41
PTP4A2-211	ENST00000528840	MED19	A0JLT2	244 aa	Predicted RBP	12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	SFI1	A8K8P3	1242 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ABLIM3	O94929	683 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	SEC24A	O95486	1093 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	CEBPB	P17676	345 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	MUT	P22033	750 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	TARS	P26639	723 aa	Known RBP	12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	GRM5	P41594	1212 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	NPTX2	P47972	431 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ROR1	Q01973	937 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	GNL2	Q13823	731 aa	Known RBP	12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	NBR1	Q14596	966 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ZNF528	Q3MIS6	628 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	XKR4	Q5GH76	650 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	HAUS3	Q68CZ6	603 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	TSSK4	Q6SA08	328 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	ZNF852	Q6ZMS4	543 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	CCDC83	Q8IWF9	413 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	C4orf32	Q8N8J7	132 aa		12.47	□□□□□ -0.41
PTP4A2-211	ENST00000528840	TCEAL4	Q96EI5	215 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms