RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 GPD1LQ8N335 351 aa14.22□□□□□ -0.13
CNKSR1-211ENST00000528001 ZMAT2Q96NC0 199 aaKnown RBP14.22□□□□□ -0.13
CNKSR1-211ENST00000528001 CDCA3Q99618 268 aaPredicted RBP14.22□□□□□ -0.13
CNKSR1-211ENST00000528001 CBWD1Q9BRT8 395 aa14.22□□□□□ -0.13
CNKSR1-211ENST00000528001 KCTD10Q9H3F6 313 aa14.22□□□□□ -0.13
CNKSR1-211ENST00000528001 ALG13Q9NP73 1137 aaKnown RBP14.22□□□□□ -0.13
CNKSR1-211ENST00000528001 LMBRD1Q9NUN5 540 aa14.22□□□□□ -0.13
CNKSR1-211ENST00000528001 MARCH5Q9NX47 278 aa14.22□□□□□ -0.13
CNKSR1-211ENST00000528001 ADAM28Q9UKQ2 775 aa14.22□□□□□ -0.13
CNKSR1-211ENST00000528001 UBQLN1Q9UMX0 589 aaKnown RBP14.22□□□□□ -0.13
CNKSR1-211ENST00000528001 TRAF3IP3Q9Y228 551 aa14.22□□□□□ -0.13
CNKSR1-211ENST00000528001 SSX2IPQ9Y2D8 614 aa14.22□□□□□ -0.13
CNKSR1-211ENST00000528001 PCDHA5Q9Y5H7 936 aa14.22□□□□□ -0.13
CNKSR1-211ENST00000528001 TDRD15B5MCY1 1934 aaKnown RBP14.21□□□□□ -0.13
CNKSR1-211ENST00000528001 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.21□□□□□ -0.13
CNKSR1-211ENST00000528001 C1RP00736 705 aa14.21□□□□□ -0.13
CNKSR1-211ENST00000528001 SOD2P04179 222 aa14.21□□□□□ -0.13
CNKSR1-211ENST00000528001 LRPAP1P30533 357 aa14.21□□□□□ -0.13
CNKSR1-211ENST00000528001 SURF1Q15526 300 aa14.21□□□□□ -0.13
CNKSR1-211ENST00000528001 UPP1Q16831 310 aa14.21□□□□□ -0.13
CNKSR1-211ENST00000528001 DCLRE1AQ6PJP8 1040 aa14.21□□□□□ -0.13
CNKSR1-211ENST00000528001 FOXR2Q6PJQ5 311 aa14.21□□□□□ -0.13
CNKSR1-211ENST00000528001 TMEM173Q86WV6 379 aaPredicted RBP14.21□□□□□ -0.13
CNKSR1-211ENST00000528001 XXYLT1Q8NBI6 393 aa14.21□□□□□ -0.13
CNKSR1-211ENST00000528001 MAFAQ8NHW3 353 aaPredicted RBP14.21□□□□□ -0.13
CNKSR1-211ENST00000528001 HSPBP1Q9NZL4 362 aa14.21□□□□□ -0.13
CNKSR1-211ENST00000528001 SF3B1O75533 1304 aaKnown RBP eCLIP14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 ZNF233A6NK53 670 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 LACTBL1A8MY62 500 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 MAPK13O15264 365 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 CTSAP10619 480 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 DNAJB1P25685 340 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 PBX3P40426 434 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 ACOT2P49753 483 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 ENPEPQ07075 957 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 SMC1AQ14683 1233 aaKnown RBP14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 TPRNQ4KMQ1 711 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 SEZ6Q53EL9 994 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 ZBTB41Q5SVQ8 909 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 SPATA1Q5VX52 437 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 TRIML1Q8N9V2 468 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 KIF12Q96FN5 646 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 FAM213AQ9BRX8 229 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 HERC2P3Q9BVR0 1158 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 ZBP1Q9H171 429 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 CXCL16Q9H2A7 254 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 IKZF4Q9H2S9 585 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 CHST7Q9NS84 486 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 DMAC2Q9NW81 257 aa14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 RBAKQ9NYW8 714 aaPredicted RBP14.2□□□□□ -0.14
CNKSR1-211ENST00000528001 CITO14578 2027 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 PLXNA4Q9HCM2 1894 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 NT5C1B-RDH14C9J2C7 533 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 TRAPPC3O43617 180 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 CALUO43852 315 aaPredicted RBP14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 TADA2AO75478 443 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 MCCD1P59942 119 aaPredicted RBP14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 ERVFC1P60507 584 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 CREMQ03060 361 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 SOX4Q06945 474 aaPredicted RBP14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 EDRF1Q3B7T1 1238 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 GLRA4Q5JXX5 417 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 FUT10Q6P4F1 479 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 PDXDC1Q6P996 788 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 NELFCDQ8IXH7 590 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 VPS52Q8N1B4 723 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 MRPL43Q8N983 215 aaKnown RBP14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 BEST2Q8NFU1 509 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 BCL7CQ8WUZ0 217 aaPredicted RBP14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 TCF25Q9BQ70 676 aa14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 PRG3Q9Y2Y8 225 aaPredicted RBP14.19□□□□□ -0.14
CNKSR1-211ENST00000528001 PDCD11Q14690 1871 aaKnown RBP14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 CASTOR2A6NHX0 329 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 LILRB3O75022 631 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 KIF4AO95239 1232 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 CLCNKBP51801 687 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 DSG1Q02413 1049 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 TMEM132DQ14C87 1099 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 SNRNP35Q16560 246 aaKnown RBP14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 USP41Q3LFD5 358 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 ZCWPW2Q504Y3 356 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 JADE1Q6IE81 842 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 TMC7Q7Z402 723 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 CACTINQ8WUQ7 758 aaKnown RBP14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 SAAL1Q96ER3 474 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 VN1R3Q9BXE9 311 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 ENTPD7Q9NQZ7 604 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 KIAA1468Q9P260 1216 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 COG5Q9UP83 839 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 EYSQ5T1H1 3165 aa14.18□□□□□ -0.14
CNKSR1-211ENST00000528001 ANO9A1A5B4 782 aa14.17□□□□□ -0.14
CNKSR1-211ENST00000528001 PODXLO00592 558 aa14.17□□□□□ -0.14
CNKSR1-211ENST00000528001 B3GAT3O94766 335 aa14.17□□□□□ -0.14
CNKSR1-211ENST00000528001 MBD3O95983 291 aa14.17□□□□□ -0.14
CNKSR1-211ENST00000528001 RPL13P26373 211 aaKnown RBP14.17□□□□□ -0.14
CNKSR1-211ENST00000528001 IRS1P35568 1242 aa14.17□□□□□ -0.14
CNKSR1-211ENST00000528001 AARSP49588 968 aaKnown RBP eCLIP14.17□□□□□ -0.14
CNKSR1-211ENST00000528001 STIM1Q13586 685 aa14.17□□□□□ -0.14
CNKSR1-211ENST00000528001 MORC3Q14149 939 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms