RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PPP3CAQ08209 521 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 ZNF268Q14587 947 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-208ENST00000527323 MFSD5Q6N075 450 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 GBP7Q8N8V2 638 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-208ENST00000527323 LMO3Q8TAP4 145 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 PLVAPQ9BX97 442 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 PNMA3Q9UL41 463 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 ARL2BPQ9Y2Y0 163 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 ATAD5Q96QE3 1844 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 ALAS1P13196 640 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 GRIPAP1Q4V328 841 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 INTS8Q75QN2 995 aaKnown RBP13.35□□□□□ -0.27
CAPN1-208ENST00000527323 SERPINB12Q96P63 405 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 FIZ1Q96SL8 496 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 WDR18Q9BV38 432 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 RAVER2Q9HCJ3 691 aaKnown RBP13.35□□□□□ -0.27
CAPN1-208ENST00000527323 NKIRAS1Q9NYS0 192 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 C15orf41Q9Y2V0 281 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 KIF13BQ9NQT8 1826 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 CHKAP35790 457 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 ZNF131P52739 623 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 NOP9Q86U38 636 aaKnown RBP13.35□□□□□ -0.27
CAPN1-208ENST00000527323 TEX2Q8IWB9 1127 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 TGS1Q96RS0 853 aaKnown RBP13.35□□□□□ -0.27
CAPN1-208ENST00000527323 ELP3Q9H9T3 547 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 KLHL14Q9P2G3 628 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 HERC5Q9UII4 1024 aaKnown RBP13.35□□□□□ -0.27
CAPN1-208ENST00000527323 TRIM33Q9UPN9 1127 aa13.35□□□□□ -0.27
CAPN1-208ENST00000527323 ZNF646O15015 1829 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-208ENST00000527323 GSTTP1A0A1W2PQM5 241 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 A8MUI8 341 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 GH1P01241 217 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 ADCY8P40145 1251 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 LACTBP83111 547 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-208ENST00000527323 SLC47A2Q86VL8 602 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 MORC4Q8TE76 937 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 OTUD5Q96G74 571 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 R3HDMLQ9H3Y0 253 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 EBF2Q9HAK2 575 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 ARHGEF10LQ9HCE6 1279 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 GOLGA8IPA6NC78 632 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 GOLGA8JA6NMD2 632 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 KRT16P08779 473 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 TNFAIP8L3Q5GJ75 292 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 VSTM1Q6UX27 236 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 SEPT14Q6ZU15 432 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 PHLDB2Q86SQ0 1253 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 SULF1Q8IWU6 871 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 SRRM1Q8IYB3 904 aaKnown RBP13.34□□□□□ -0.27
CAPN1-208ENST00000527323 ATG4AQ8WYN0 398 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 CBWD1Q9BRT8 395 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 ZNF577Q9BSK1 485 aa13.34□□□□□ -0.27
CAPN1-208ENST00000527323 IGLV3-22A0A075B6J6 115 aa13.33□□□□□ -0.27
CAPN1-208ENST00000527323 SKAP2O75563 359 aaPredicted RBP13.33□□□□□ -0.27
CAPN1-208ENST00000527323 PSMD10O75832 226 aa13.33□□□□□ -0.27
CAPN1-208ENST00000527323 CYP3A4P08684 503 aa13.33□□□□□ -0.27
CAPN1-208ENST00000527323 MMP14P50281 582 aa13.33□□□□□ -0.27
CAPN1-208ENST00000527323 ATP11AP98196 1134 aa13.33□□□□□ -0.27
CAPN1-208ENST00000527323 BNIP1Q12981 228 aa13.33□□□□□ -0.27
CAPN1-208ENST00000527323 CYP1B1Q16678 543 aa13.33□□□□□ -0.27
CAPN1-208ENST00000527323 EPS8L1Q8TE68 723 aa13.33□□□□□ -0.27
CAPN1-208ENST00000527323 VTI1AQ96AJ9 217 aa13.33□□□□□ -0.27
CAPN1-208ENST00000527323 DCPSQ96C86 337 aaKnown RBP13.33□□□□□ -0.27
CAPN1-208ENST00000527323 TRIM7Q9C029 511 aa13.33□□□□□ -0.27
CAPN1-208ENST00000527323 WRAP73Q9P2S5 460 aaPredicted RBP13.33□□□□□ -0.27
CAPN1-208ENST00000527323 ANAPC5Q9UJX4 755 aa13.33□□□□□ -0.27
CAPN1-208ENST00000527323 UBE4BO95155 1302 aa13.33□□□□□ -0.27
CAPN1-208ENST00000527323 TTC4O95801 387 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 CHRNB2P17787 502 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 ITIH2P19823 946 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 CCND1P24385 295 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 PSEN1P49768 467 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 MXI1P50539 228 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 STAT2P52630 851 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 ITGA8P53708 1063 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 DPY19L2Q6NUT2 758 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 FITM2Q8N6M3 262 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 CKAP2Q8WWK9 683 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 CCDC127Q96BQ5 260 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 PWWP2AQ96N64 755 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 PLCD4Q9BRC7 762 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 LXNQ9BS40 222 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 TRIM6Q9C030 488 aaPredicted RBP13.33□□□□□ -0.28
CAPN1-208ENST00000527323 WHRNQ9P202 907 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 LARSQ9P2J5 1176 aaKnown RBP13.33□□□□□ -0.28
CAPN1-208ENST00000527323 ATRNL1Q5VV63 1379 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 ARFGEF1Q9Y6D6 1849 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 LAMA3Q16787 3333 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 GZMAP12544 262 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 MSH2P43246 934 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 TNFAIP1Q13829 316 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 PADI6Q6TGC4 694 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 FAM47EQ6ZV65 393 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 FAM83AQ86UY5 434 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 LRRC19Q9H756 370 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 RRAGCQ9HB90 399 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 AAASQ9NRG9 546 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 CHST7Q9NS84 486 aa13.33□□□□□ -0.28
CAPN1-208ENST00000527323 GAS8O95995 478 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 ASNSP08243 561 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms