RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 SYCE3A1L190 88 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 NT5C1B-RDH14C9J2C7 533 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 C5orf67F2Z3F1 127 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 PSMA7O14818 248 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 PPEF2O14830 753 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 EXOC3O60645 756 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 LPXNO60711 386 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 KIF20AO95235 890 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 ITGB1P05556 798 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 THP07101 528 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 ERCC5P28715 1186 aaPredicted RBP11.7□□□□□ -0.54
NEDD8-205ENST00000527046 BMPR1AP36894 532 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 PPP1R2P41236 205 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 SLC11A1P49279 550 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 GUCY2FP51841 1108 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 FKBP3Q00688 224 aaKnown RBP11.7□□□□□ -0.54
NEDD8-205ENST00000527046 LRRC63Q05C16 580 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 GRIK3Q13003 919 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 PAK1Q13153 545 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 SPATA1Q5VX52 437 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 APBB1IPQ7Z5R6 666 aaPredicted RBP11.7□□□□□ -0.54
NEDD8-205ENST00000527046 C3orf58Q8NDZ4 430 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 SRRTQ9BXP5 876 aaKnown RBP11.7□□□□□ -0.54
NEDD8-205ENST00000527046 KIAA1586Q9HCI6 787 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 TOPORSQ9NS56 1045 aaPredicted RBP11.7□□□□□ -0.54
NEDD8-205ENST00000527046 TUBGCP4Q9UGJ1 667 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 PLXNA4Q9HCM2 1894 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 LAMA3Q16787 3333 aa11.7□□□□□ -0.54
NEDD8-205ENST00000527046 SCN1AP35498 2009 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 ANO9A1A5B4 782 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 LRRIQ3A6PVS8 624 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-205ENST00000527046 RFXAPO00287 272 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 PIRO00625 290 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 NRP1O14786 923 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 LRRN2O75325 713 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 CST3P01034 146 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-205ENST00000527046 C4BPAP04003 597 aaKnown RBP11.69□□□□□ -0.54
NEDD8-205ENST00000527046 DNAJB1P25685 340 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 LRPAP1P30533 357 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 FXR1P51114 621 aaKnown RBP eCLIP11.69□□□□□ -0.54
NEDD8-205ENST00000527046 YARSP54577 528 aaKnown RBP11.69□□□□□ -0.54
NEDD8-205ENST00000527046 BCAR1P56945 870 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 TUSC3Q13454 348 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 RAB30Q15771 203 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 UPP1Q16831 310 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 EPC2Q52LR7 807 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 CT47A1Q5JQC4 288 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-205ENST00000527046 LMBRD2Q68DH5 695 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-205ENST00000527046 KCNT2Q6UVM3 1135 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 C15orf39Q6ZRI6 1047 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 FILIP1Q7Z7B0 1213 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 CD302Q8IX05 232 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 HACE1Q8IYU2 909 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 RNF168Q8IYW5 571 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-205ENST00000527046 SLC39A11Q8N1S5 342 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 LRRC43Q8N309 656 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 COLGALT1Q8NBJ5 622 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 ENOX1Q8TC92 643 aaKnown RBP11.69□□□□□ -0.54
NEDD8-205ENST00000527046 TMC2Q8TDI7 906 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 RSPH1Q8WYR4 309 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 TIFAQ96CG3 184 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 TMEM175Q9BSA9 504 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 MKNK1Q9BUB5 465 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 DNAJC25Q9H1X3 360 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 CERS4Q9HA82 394 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 INTS13Q9NVM9 706 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 RBAKQ9NYW8 714 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-205ENST00000527046 SIX4Q9UIU6 781 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 MSRAQ9UJ68 235 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 DERAQ9Y315 318 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 C2CD2Q9Y426 696 aa11.69□□□□□ -0.54
NEDD8-205ENST00000527046 CHD9Q3L8U1 2897 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 CASTOR2A6NHX0 329 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 IL18RAPO95256 599 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 CYP3A5P20815 502 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 PSMC2P35998 433 aaKnown RBP11.68□□□□□ -0.54
NEDD8-205ENST00000527046 CLCNKBP51801 687 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 MARSP56192 900 aaKnown RBP11.68□□□□□ -0.54
NEDD8-205ENST00000527046 PPP2R3AQ06190 1150 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 PPP3CAQ08209 521 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 IQCB1Q15051 598 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 CEP135Q66GS9 1140 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 SASS6Q6UVJ0 657 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 TAS1R1Q7RTX1 841 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 DHX40Q8IX18 779 aaKnown RBP11.68□□□□□ -0.54
NEDD8-205ENST00000527046 ABI1Q8IZP0 508 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 C1orf127Q8N9H9 656 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 SPPL3Q8TCT6 385 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 KIF12Q96FN5 646 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 CEP63Q96MT8 703 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 TSPAN18Q96SJ8 248 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 MRPL9Q9BYD2 267 aaKnown RBP11.68□□□□□ -0.54
NEDD8-205ENST00000527046 ZNF576Q9H609 170 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 SAMSN1Q9NSI8 373 aaKnown RBP11.68□□□□□ -0.54
NEDD8-205ENST00000527046 ANO10Q9NW15 660 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 ATG2AQ2TAZ0 1938 aa11.68□□□□□ -0.54
NEDD8-205ENST00000527046 LAMA2P24043 3122 aaKnown RBP11.67□□□□□ -0.54
NEDD8-205ENST00000527046 CETN3O15182 167 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 SPTLC1O15269 473 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms