RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 NAB2Q15742 525 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 CCDC40Q4G0X9 1142 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 CDKAL1Q5VV42 579 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 JADE1Q6IE81 842 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 FAM117BQ6P1L5 589 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 WDR49Q8IV35 697 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 EFCAB13Q8IY85 973 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 CCDC127Q96BQ5 260 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 FNBP1Q96RU3 617 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 YME1L1Q96TA2 773 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 CGRRF1Q99675 332 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 HSD3B7Q9H2F3 369 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 SAMSN1Q9NSI8 373 aaKnown RBP17.91■□□□□ 0.46
CAPN1-205ENST00000526954 SLC38A7Q9NVC3 462 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 TBC1D13Q9NVG8 400 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 PLAGL2Q9UPG8 496 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 INPP5FQ9Y2H2 1132 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-205ENST00000526954 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-205ENST00000526954 A0A1W2PPC1 479 aa17.9■□□□□ 0.46
CAPN1-205ENST00000526954 BECN2A8MW95 431 aa17.9■□□□□ 0.46
CAPN1-205ENST00000526954 TLL1O43897 1013 aa17.9■□□□□ 0.46
CAPN1-205ENST00000526954 POMCP01189 267 aa17.9■□□□□ 0.46
CAPN1-205ENST00000526954 NFICP08651 508 aa17.9■□□□□ 0.46
CAPN1-205ENST00000526954 CYP3A5P20815 502 aa17.9■□□□□ 0.46
CAPN1-205ENST00000526954 DSC1Q08554 894 aa17.9■□□□□ 0.46
CAPN1-205ENST00000526954 TMEM132DQ14C87 1099 aa17.9■□□□□ 0.46
CAPN1-205ENST00000526954 C1orf220Q5T0J3 134 aa17.9■□□□□ 0.46
CAPN1-205ENST00000526954 TRIM59Q8IWR1 403 aa17.9■□□□□ 0.46
CAPN1-205ENST00000526954 LRRC43Q8N309 656 aa17.9■□□□□ 0.46
CAPN1-205ENST00000526954 SP7Q8TDD2 431 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-205ENST00000526954 KIF12Q96FN5 646 aa17.9■□□□□ 0.46
CAPN1-205ENST00000526954 CNOT6LQ96LI5 555 aaKnown RBP17.9■□□□□ 0.46
CAPN1-205ENST00000526954 INTS13Q9NVM9 706 aa17.9■□□□□ 0.46
CAPN1-205ENST00000526954 UBQLN1Q9UMX0 589 aaKnown RBP17.9■□□□□ 0.46
CAPN1-205ENST00000526954 LRRIQ3A6PVS8 624 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-205ENST00000526954 XPOTO43592 962 aaKnown RBP17.89■□□□□ 0.45
CAPN1-205ENST00000526954 DLATP10515 647 aaKnown RBP17.89■□□□□ 0.45
CAPN1-205ENST00000526954 ZNF18P17022 549 aa17.89■□□□□ 0.45
CAPN1-205ENST00000526954 EEF1GP26641 437 aaKnown RBP17.89■□□□□ 0.45
CAPN1-205ENST00000526954 GTF2H1P32780 548 aa17.89■□□□□ 0.45
CAPN1-205ENST00000526954 AP3M2P53677 418 aa17.89■□□□□ 0.45
CAPN1-205ENST00000526954 DLG4P78352 724 aa17.89■□□□□ 0.45
CAPN1-205ENST00000526954 SPAG1Q07617 926 aa17.89■□□□□ 0.45
CAPN1-205ENST00000526954 BTG3Q14201 252 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-205ENST00000526954 GLRA4Q5JXX5 417 aa17.89■□□□□ 0.45
CAPN1-205ENST00000526954 FAM109BQ6ICB4 259 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-205ENST00000526954 LUZP1Q86V48 1076 aa17.89■□□□□ 0.45
CAPN1-205ENST00000526954 CACTINQ8WUQ7 758 aaKnown RBP17.89■□□□□ 0.45
CAPN1-205ENST00000526954 POP1Q99575 1024 aaKnown RBP17.89■□□□□ 0.45
CAPN1-205ENST00000526954 MAGEC2Q9UBF1 373 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-205ENST00000526954 PCDHA11Q9Y5I1 949 aa17.89■□□□□ 0.45
CAPN1-205ENST00000526954 KCNJ18B7U540 433 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 DDHD2O94830 711 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 TNNI1P19237 187 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 RNASELQ05823 741 aaKnown RBP17.88■□□□□ 0.45
CAPN1-205ENST00000526954 TUSC3Q13454 348 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 KCNJ12Q14500 433 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 DUOXA2Q1HG44 320 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 PAN2Q504Q3 1202 aaKnown RBP17.88■□□□□ 0.45
CAPN1-205ENST00000526954 TCP11X2Q5H9J9 407 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 PRPF38BQ5VTL8 546 aaKnown RBP17.88■□□□□ 0.45
CAPN1-205ENST00000526954 ZNF280BQ86YH2 543 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 COLGALT2Q8IYK4 626 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 BEST2Q8NFU1 509 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 ZNF516Q92618 1163 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 SLC35C1Q96A29 364 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 CWH43Q9H720 699 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 NRDE2Q9H7Z3 1164 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 PTPRJQ12913 1337 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 KIAA1671Q9BY89 1806 aa17.88■□□□□ 0.45
CAPN1-205ENST00000526954 GRXCR1A8MXD5 290 aa17.87■□□□□ 0.45
CAPN1-205ENST00000526954 STX10O60499 249 aa17.87■□□□□ 0.45
CAPN1-205ENST00000526954 TRIM49P0CI25 452 aa17.87■□□□□ 0.45
CAPN1-205ENST00000526954 TRIM49CP0CI26 452 aa17.87■□□□□ 0.45
CAPN1-205ENST00000526954 LRPAP1P30533 357 aa17.87■□□□□ 0.45
CAPN1-205ENST00000526954 RPL9P32969 192 aaKnown RBP17.87■□□□□ 0.45
CAPN1-205ENST00000526954 RABGGTBP53611 331 aa17.87■□□□□ 0.45
CAPN1-205ENST00000526954 TFAMQ00059 246 aaKnown RBP17.87■□□□□ 0.45
CAPN1-205ENST00000526954 SOX4Q06945 474 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-205ENST00000526954 FIBCD1Q8N539 461 aa17.87■□□□□ 0.45
CAPN1-205ENST00000526954 OR5B17Q8NGF7 314 aa17.87■□□□□ 0.45
CAPN1-205ENST00000526954 C18orf25Q96B23 403 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-205ENST00000526954 ANKRD36BP1Q96IX9 119 aa17.87■□□□□ 0.45
CAPN1-205ENST00000526954 UROC1Q96N76 676 aa17.87■□□□□ 0.45
CAPN1-205ENST00000526954 FAM193BQ96PV7 902 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-205ENST00000526954 TMEM175Q9BSA9 504 aa17.87■□□□□ 0.45
CAPN1-205ENST00000526954 NLRC5Q86WI3 1866 aa17.86■□□□□ 0.45
CAPN1-205ENST00000526954 CARNS1A5YM72 827 aa17.86■□□□□ 0.45
CAPN1-205ENST00000526954 LRRC10BA6NIK2 292 aa17.86■□□□□ 0.45
CAPN1-205ENST00000526954 B4GALT3O60512 393 aa17.86■□□□□ 0.45
CAPN1-205ENST00000526954 C4BPAP04003 597 aaKnown RBP17.86■□□□□ 0.45
CAPN1-205ENST00000526954 TMEM191BP0C7N4 346 aa17.86■□□□□ 0.45
CAPN1-205ENST00000526954 MTIF2P46199 727 aaKnown RBP17.86■□□□□ 0.45
CAPN1-205ENST00000526954 PPP3CAQ08209 521 aa17.86■□□□□ 0.45
CAPN1-205ENST00000526954 HSP90AA4PQ58FG1 418 aa17.86■□□□□ 0.45
CAPN1-205ENST00000526954 LMBRD2Q68DH5 695 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-205ENST00000526954 C15orf39Q6ZRI6 1047 aa17.86■□□□□ 0.45
CAPN1-205ENST00000526954 CLP1Q92989 425 aaKnown RBP17.86■□□□□ 0.45
CAPN1-205ENST00000526954 DDX27Q96GQ7 796 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms