RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 ACOT2P49753 483 aa17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 SOX4Q06945 474 aaPredicted RBP17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 AAK1Q2M2I8 961 aa17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 FUT10Q6P4F1 479 aa17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 EPM2AIP1Q7L775 607 aaPredicted RBP17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 RNF168Q8IYW5 571 aaPredicted RBP17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 C18orf25Q96B23 403 aaPredicted RBP17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 UROC1Q96N76 676 aa17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 ASB2Q96Q27 587 aa17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 CDCA3Q99618 268 aaPredicted RBP17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 HERC2P3Q9BVR0 1158 aa17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 GOLGA2P5Q9HBQ8 144 aa17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 SLC39A2Q9NP94 309 aa17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 IRAK3Q9Y616 596 aa17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 UNC80Q8N2C7 3258 aa17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 EIF3DO15371 548 aaKnown RBP eCLIP17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 LILRB3O75022 631 aa17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 MYL1P05976 194 aa17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 ADRB2P07550 413 aa17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 IGFBP6P24592 240 aaPredicted RBP17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 CLCNKBP51801 687 aa17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 SPAG1Q07617 926 aa17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 DLX2Q07687 328 aaPredicted RBP17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 UPP1Q16831 310 aa17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 KIAA0319Q5VV43 1072 aa17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 TMEM87AQ8NBN3 555 aa17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 HASPINQ8TF76 798 aa17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 FAM212AQ96EL1 285 aa17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 DDX27Q96GQ7 796 aaKnown RBP17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 MRPL17Q9NRX2 175 aaKnown RBP17.66■□□□□ 0.42
SSSCA1-202ENST00000526433 PDCD11Q14690 1871 aaKnown RBP17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 H3BQ06 376 aaPredicted RBP17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 CLASP2O75122 1294 aaKnown RBP17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 KIF4AO95239 1232 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 GARTP22102 1010 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 RPL9P32969 192 aaKnown RBP17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 PPP2R3AQ06190 1150 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 PSMD2Q13200 908 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 PTPN14Q15678 1187 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 ZBTB6Q15916 424 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 USP41Q3LFD5 358 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 LEXMQ3ZCV2 418 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 KMT5BQ4FZB7 885 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 KIAA1841Q6NSI8 718 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 CD300LGQ6UXG3 332 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 CRELD2Q6UXH1 353 aaPredicted RBP17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 CD302Q8IX05 232 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 FMR1NBQ8N0W7 255 aaPredicted RBP17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 SCFD1Q8WVM8 642 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 KIF12Q96FN5 646 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 CHST7Q9NS84 486 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 SSX2IPQ9Y2D8 614 aa17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 TCF20Q9UGU0 1960 aaKnown RBP17.65■□□□□ 0.42
SSSCA1-202ENST00000526433 SPTBN5Q9NRC6 3674 aaKnown RBP17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 C2CD2LO14523 706 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 B3GAT3O94766 335 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 RPN1P04843 607 aaKnown RBP17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 URODP06132 367 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 PRR29P0C7W0 189 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 BMP1P13497 986 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 GLUD2P49448 558 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 NDUFV1P49821 464 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 KCNQ1P51787 676 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 RBM10P98175 930 aaKnown RBP17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 POU5F1Q01860 360 aaKnown RBP17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 DSG1Q02413 1049 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 STK4Q13043 487 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 KCNC3Q14003 757 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 TJAP1Q5JTD0 557 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 FAM171A1Q5VUB5 890 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 KANK3Q6NY19 840 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 ZSWIM2Q8NEG5 633 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 ENGASEQ8NFI3 743 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 VN1R2Q8NFZ6 395 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 B3GALT6Q96L58 329 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 KLHL5Q96PQ7 755 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 TSPAN18Q96SJ8 248 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 CBWD1Q9BRT8 395 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 FAM213AQ9BRX8 229 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 PCIF1Q9H4Z3 704 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 EXOC1Q9NV70 894 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 CLEC1BQ9P126 229 aa17.64■□□□□ 0.41
SSSCA1-202ENST00000526433 FSD2A1L4K1 749 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 GOLGA8IPA6NC78 632 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 GOLGA8JA6NMD2 632 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 TMEM189-UBE2V1I3L0A0 370 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 PODXLO00592 558 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 TBX10O75333 385 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 GLP2RO95838 553 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 LDHAP00338 332 aaKnown RBP17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 CNPP09543 421 aaKnown RBP17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 DPYDQ12882 1025 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 ELAVL2Q12926 359 aaKnown RBP17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 SNW1Q13573 536 aaKnown RBP17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 JADE1Q6IE81 842 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 LLGL2Q6P1M3 1020 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 ARMCX5Q6P1M9 558 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 TMEM184AQ6ZMB5 413 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms