RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 PABPC5Q96DU9 382 aaKnown RBP8.79□□□□□ -1
CHD7-203ENST00000525508 ZDHHC15Q96MV8 337 aa8.79□□□□□ -1
CHD7-203ENST00000525508 SMYD3Q9H7B4 428 aa8.79□□□□□ -1
CHD7-203ENST00000525508 PIDD1Q9HB75 910 aa8.79□□□□□ -1
CHD7-203ENST00000525508 AGPAT3Q9NRZ7 376 aa8.79□□□□□ -1
CHD7-203ENST00000525508 IRAK4Q9NWZ3 460 aa8.79□□□□□ -1
CHD7-203ENST00000525508 MRPL42Q9Y6G3 142 aaKnown RBP8.79□□□□□ -1
CHD7-203ENST00000525508 FOXN3O00409 490 aaPredicted RBP8.79□□□□□ -1
CHD7-203ENST00000525508 GH1P01241 217 aa8.79□□□□□ -1
CHD7-203ENST00000525508 COMTP21964 271 aa8.79□□□□□ -1
CHD7-203ENST00000525508 EIF3BP55884 814 aaKnown RBP8.79□□□□□ -1
CHD7-203ENST00000525508 GPAT2Q6NUI2 795 aa8.79□□□□□ -1
CHD7-203ENST00000525508 COG1Q8WTW3 980 aa8.79□□□□□ -1
CHD7-203ENST00000525508 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.79□□□□□ -1
CHD7-203ENST00000525508 IFT43Q96FT9 208 aa8.79□□□□□ -1
CHD7-203ENST00000525508 L3MBTL3Q96JM7 780 aaPredicted RBP8.79□□□□□ -1
CHD7-203ENST00000525508 LRGUKQ96M69 825 aa8.79□□□□□ -1
CHD7-203ENST00000525508 NUDT12Q9BQG2 462 aa8.79□□□□□ -1
CHD7-203ENST00000525508 RAB6BQ9NRW1 208 aa8.79□□□□□ -1
CHD7-203ENST00000525508 GTSE1Q9NYZ3 720 aa8.79□□□□□ -1
CHD7-203ENST00000525508 ALG6Q9Y672 507 aa8.79□□□□□ -1
CHD7-203ENST00000525508 SYNDIG1LA6NDD5 238 aa8.79□□□□□ -1
CHD7-203ENST00000525508 HMGB1P1B2RPK0 211 aaPredicted RBP8.79□□□□□ -1
CHD7-203ENST00000525508 TBX3O15119 743 aa8.79□□□□□ -1
CHD7-203ENST00000525508 RTN2O75298 545 aa8.79□□□□□ -1
CHD7-203ENST00000525508 TADA2AO75478 443 aa8.79□□□□□ -1
CHD7-203ENST00000525508 TADA3O75528 432 aa8.79□□□□□ -1
CHD7-203ENST00000525508 RPS6KA5O75582 802 aa8.79□□□□□ -1
CHD7-203ENST00000525508 VTNP04004 478 aa8.79□□□□□ -1
CHD7-203ENST00000525508 VCAM1P19320 739 aa8.79□□□□□ -1
CHD7-203ENST00000525508 OR1G1P47890 313 aa8.79□□□□□ -1
CHD7-203ENST00000525508 PRAMEP78395 509 aa8.79□□□□□ -1
CHD7-203ENST00000525508 DDR1Q08345 913 aa8.79□□□□□ -1
CHD7-203ENST00000525508 MXD4Q14582 209 aaPredicted RBP8.79□□□□□ -1
CHD7-203ENST00000525508 PKN1Q16512 942 aa8.79□□□□□ -1
CHD7-203ENST00000525508 TMEM259Q4ZIN3 620 aa8.79□□□□□ -1
CHD7-203ENST00000525508 IL31Q6EBC2 164 aa8.79□□□□□ -1
CHD7-203ENST00000525508 SPATS2Q86XZ4 545 aaKnown RBP8.79□□□□□ -1
CHD7-203ENST00000525508 TTC13Q8NBP0 860 aa8.79□□□□□ -1
CHD7-203ENST00000525508 RIT2Q99578 217 aa8.79□□□□□ -1
CHD7-203ENST00000525508 TRPC7Q9HCX4 862 aa8.79□□□□□ -1
CHD7-203ENST00000525508 BFARQ9NZS9 450 aa8.79□□□□□ -1
CHD7-203ENST00000525508 CPA4Q9UI42 421 aa8.79□□□□□ -1
CHD7-203ENST00000525508 GON4LQ3T8J9 2241 aa8.79□□□□□ -1
CHD7-203ENST00000525508 ITGB3P05106 788 aa8.78□□□□□ -1
CHD7-203ENST00000525508 RBP5P82980 135 aa8.78□□□□□ -1
CHD7-203ENST00000525508 ROR1Q01973 937 aa8.78□□□□□ -1
CHD7-203ENST00000525508 ART3Q13508 389 aa8.78□□□□□ -1
CHD7-203ENST00000525508 SPARCL1Q14515 664 aa8.78□□□□□ -1
CHD7-203ENST00000525508 DCAF6Q58WW2 860 aa8.78□□□□□ -1
CHD7-203ENST00000525508 AGBL3Q8NEM8 1001 aa8.78□□□□□ -1
CHD7-203ENST00000525508 URGCPQ8TCY9 931 aa8.78□□□□□ -1
CHD7-203ENST00000525508 HASPINQ8TF76 798 aa8.78□□□□□ -1
CHD7-203ENST00000525508 PGBD4Q96DM1 585 aa8.78□□□□□ -1
CHD7-203ENST00000525508 DLC1Q96QB1 1528 aa8.78□□□□□ -1
CHD7-203ENST00000525508 DIAPH2O60879 1101 aa8.78□□□□□ -1
CHD7-203ENST00000525508 CARSP49589 748 aaKnown RBP8.78□□□□□ -1
CHD7-203ENST00000525508 BACE1P56817 501 aa8.78□□□□□ -1
CHD7-203ENST00000525508 ST3GAL1Q11201 340 aa8.78□□□□□ -1
CHD7-203ENST00000525508 FAXCQ5TGI0 409 aa8.78□□□□□ -1
CHD7-203ENST00000525508 RPAINQ86UA6 219 aa8.78□□□□□ -1
CHD7-203ENST00000525508 ZNF710Q8N1W2 664 aa8.78□□□□□ -1
CHD7-203ENST00000525508 GBP7Q8N8V2 638 aaPredicted RBP8.78□□□□□ -1
CHD7-203ENST00000525508 PRPF31Q8WWY3 499 aaKnown RBP8.78□□□□□ -1
CHD7-203ENST00000525508 TNIP3Q96KP6 325 aa8.78□□□□□ -1
CHD7-203ENST00000525508 NCAPGQ9BPX3 1015 aa8.78□□□□□ -1
CHD7-203ENST00000525508 ERAP1Q9NZ08 941 aa8.78□□□□□ -1
CHD7-203ENST00000525508 DBR1Q9UK59 544 aaKnown RBP8.78□□□□□ -1
CHD7-203ENST00000525508 GNGT2O14610 69 aa8.78□□□□□ -1
CHD7-203ENST00000525508 KRT38O76015 456 aa8.78□□□□□ -1
CHD7-203ENST00000525508 TYK2P29597 1187 aa8.78□□□□□ -1
CHD7-203ENST00000525508 CHRNA3P32297 505 aa8.78□□□□□ -1
CHD7-203ENST00000525508 FXR2P51116 673 aaKnown RBP eCLIP8.78□□□□□ -13e-6■■■■□ 20.8
CHD7-203ENST00000525508 PDE1CQ14123 709 aaPredicted RBP8.78□□□□□ -1
CHD7-203ENST00000525508 TAF1BQ53T94 588 aaPredicted RBP8.78□□□□□ -1
CHD7-203ENST00000525508 KCNT1Q5JUK3 1230 aa8.78□□□□□ -1
CHD7-203ENST00000525508 C4orf33Q8N1A6 199 aa8.78□□□□□ -1
CHD7-203ENST00000525508 SYT2Q8N9I0 419 aaPredicted RBP8.78□□□□□ -1
CHD7-203ENST00000525508 APPL2Q8NEU8 664 aa8.78□□□□□ -1
CHD7-203ENST00000525508 RAPGEF5Q92565 580 aa8.78□□□□□ -1
CHD7-203ENST00000525508 TTC1Q99614 292 aa8.78□□□□□ -1
CHD7-203ENST00000525508 POLR3CQ9BUI4 534 aaPredicted RBP8.78□□□□□ -1
CHD7-203ENST00000525508 CYP4F11Q9HBI6 524 aa8.78□□□□□ -1
CHD7-203ENST00000525508 WNT10BO00744 389 aa8.78□□□□□ -1
CHD7-203ENST00000525508 RGL2O15211 777 aa8.78□□□□□ -1
CHD7-203ENST00000525508 CTIFO43310 598 aaKnown RBP8.78□□□□□ -1
CHD7-203ENST00000525508 B3GAT3O94766 335 aa8.78□□□□□ -1
CHD7-203ENST00000525508 ICAM1P05362 532 aa8.78□□□□□ -1
CHD7-203ENST00000525508 HOXD10P28358 340 aa8.78□□□□□ -1
CHD7-203ENST00000525508 PMS1P54277 932 aaKnown RBP8.78□□□□□ -1
CHD7-203ENST00000525508 PCSK7Q16549 785 aa8.78□□□□□ -1
CHD7-203ENST00000525508 KIF19Q2TAC6 998 aa8.78□□□□□ -1
CHD7-203ENST00000525508 RASIP1Q5U651 963 aa8.78□□□□□ -1
CHD7-203ENST00000525508 KLHDC7AQ5VTJ3 777 aa8.78□□□□□ -1
CHD7-203ENST00000525508 TRMT10CQ7L0Y3 403 aaKnown RBP8.78□□□□□ -1
CHD7-203ENST00000525508 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.78□□□□□ -1
CHD7-203ENST00000525508 ASIC4Q96FT7 647 aa8.78□□□□□ -1
CHD7-203ENST00000525508 MAP3K14Q99558 947 aa8.78□□□□□ -1
CHD7-203ENST00000525508 SEPT5Q99719 369 aaPredicted RBP8.78□□□□□ -1
CHD7-203ENST00000525508 PACSIN1Q9BY11 444 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms