RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ATF7IP2Q5U623 682 aa26.36■■□□□ 1.81
USP47-205ENST00000525257 NPAS3Q8IXF0 933 aa26.36■■□□□ 1.81
USP47-205ENST00000525257 I3L4J1 428 aa26.35■■□□□ 1.81
USP47-205ENST00000525257 EFNA5P52803 228 aa26.35■■□□□ 1.81
USP47-205ENST00000525257 DNAH14Q0VDD8 3507 aa26.35■■□□□ 1.81
USP47-205ENST00000525257 UBXN2BQ14CS0 331 aa26.35■■□□□ 1.81
USP47-205ENST00000525257 SLC44A4Q53GD3 710 aa26.35■■□□□ 1.81
USP47-205ENST00000525257 MAML2Q8IZL2 1156 aaPredicted RBP26.35■■□□□ 1.81
USP47-205ENST00000525257 DDX23Q9BUQ8 820 aaKnown RBP26.35■■□□□ 1.81
USP47-205ENST00000525257 CCT6AP40227 531 aaKnown RBP26.34■■□□□ 1.81
USP47-205ENST00000525257 BRCC3P46736 316 aa26.34■■□□□ 1.81
USP47-205ENST00000525257 PRKCQQ04759 706 aa26.34■■□□□ 1.81
USP47-205ENST00000525257 ECM1Q16610 540 aa26.34■■□□□ 1.81
USP47-205ENST00000525257 UPP1Q16831 310 aa26.34■■□□□ 1.81
USP47-205ENST00000525257 HAUS3Q68CZ6 603 aa26.34■■□□□ 1.81
USP47-205ENST00000525257 CD300LGQ6UXG3 332 aa26.34■■□□□ 1.81
USP47-205ENST00000525257 C3orf58Q8NDZ4 430 aa26.34■■□□□ 1.81
USP47-205ENST00000525257 RMDN1Q96DB5 314 aa26.34■■□□□ 1.81
USP47-205ENST00000525257 DDX27Q96GQ7 796 aaKnown RBP26.34■■□□□ 1.81
USP47-205ENST00000525257 UROC1Q96N76 676 aa26.34■■□□□ 1.81
USP47-205ENST00000525257 BCO2Q9BYV7 579 aa26.34■■□□□ 1.81
USP47-205ENST00000525257 BHMT2Q9H2M3 363 aa26.34■■□□□ 1.81
USP47-205ENST00000525257 SPATA6Q9NWH7 488 aaPredicted RBP26.34■■□□□ 1.81
USP47-205ENST00000525257 KCNH3Q9ULD8 1083 aa26.34■■□□□ 1.81
USP47-205ENST00000525257 MRPS23Q9Y3D9 190 aaKnown RBP26.34■■□□□ 1.81
USP47-205ENST00000525257 MTF2Q9Y483 593 aaPredicted RBP26.34■■□□□ 1.81
USP47-205ENST00000525257 PATJQ8NI35 1801 aa26.34■■□□□ 1.81
USP47-205ENST00000525257 CD72P21854 359 aa26.33■■□□□ 1.81
USP47-205ENST00000525257 PFKPQ01813 784 aa26.33■■□□□ 1.81
USP47-205ENST00000525257 CEP120Q8N960 986 aa26.33■■□□□ 1.81
USP47-205ENST00000525257 KIFAP3Q92845 792 aa26.33■■□□□ 1.81
USP47-205ENST00000525257 BACE2Q9Y5Z0 518 aa26.33■■□□□ 1.81
USP47-205ENST00000525257 TRAPPC3O43617 180 aa26.32■■□□□ 1.8
USP47-205ENST00000525257 ORC2Q13416 577 aaPredicted RBP26.32■■□□□ 1.8
USP47-205ENST00000525257 TTC38Q5R3I4 469 aa26.32■■□□□ 1.8
USP47-205ENST00000525257 ANKS3Q6ZW76 656 aa26.32■■□□□ 1.8
USP47-205ENST00000525257 APBB1IPQ7Z5R6 666 aaPredicted RBP26.32■■□□□ 1.8
USP47-205ENST00000525257 MCRS1Q96EZ8 462 aa26.32■■□□□ 1.8
USP47-205ENST00000525257 C8orf76Q96K31 380 aa26.32■■□□□ 1.8
USP47-205ENST00000525257 SMIM28A0A1B0GU29 152 aa26.31■■□□□ 1.8
USP47-205ENST00000525257 FAM170BA6NMN3 283 aa26.31■■□□□ 1.8
USP47-205ENST00000525257 K7ERI5 159 aa26.31■■□□□ 1.8
USP47-205ENST00000525257 LAMTOR5O43504 91 aa26.31■■□□□ 1.8
USP47-205ENST00000525257 MUTP22033 750 aa26.31■■□□□ 1.8
USP47-205ENST00000525257 OSTNP61366 133 aa26.31■■□□□ 1.8
USP47-205ENST00000525257 SOX4Q06945 474 aaPredicted RBP26.31■■□□□ 1.8
USP47-205ENST00000525257 SLC5A9Q2M3M2 681 aa26.31■■□□□ 1.8
USP47-205ENST00000525257 RTL10Q7L3V2 364 aa26.31■■□□□ 1.8
USP47-205ENST00000525257 DCLK2Q8N568 766 aa26.31■■□□□ 1.8
USP47-205ENST00000525257 RUBCNQ92622 972 aa26.31■■□□□ 1.8
USP47-205ENST00000525257 LTB4R2Q9NPC1 389 aa26.31■■□□□ 1.8
USP47-205ENST00000525257 TNFSF13BQ9Y275 285 aa26.31■■□□□ 1.8
USP47-205ENST00000525257 KINO60870 393 aaKnown RBP26.3■■□□□ 1.8
USP47-205ENST00000525257 RHOP08100 348 aa26.3■■□□□ 1.8
USP47-205ENST00000525257 YARSP54577 528 aaKnown RBP26.3■■□□□ 1.8
USP47-205ENST00000525257 TPRG1Q6ZUI0 275 aa26.3■■□□□ 1.8
USP47-205ENST00000525257 CCDC94Q9BW85 323 aaPredicted RBP26.3■■□□□ 1.8
USP47-205ENST00000525257 CDT1Q9H211 546 aa26.3■■□□□ 1.8
USP47-205ENST00000525257 KIAA1024Q9UPX6 916 aa26.3■■□□□ 1.8
USP47-205ENST00000525257 CEP250Q9BV73 2442 aa26.3■■□□□ 1.8
USP47-205ENST00000525257 CCDC169A6NNP5 214 aa26.29■■□□□ 1.8
USP47-205ENST00000525257 CEBPBP17676 345 aa26.29■■□□□ 1.8
USP47-205ENST00000525257 GRM5P41594 1212 aa26.29■■□□□ 1.8
USP47-205ENST00000525257 ROR1Q01973 937 aa26.29■■□□□ 1.8
USP47-205ENST00000525257 NBR1Q14596 966 aa26.29■■□□□ 1.8
USP47-205ENST00000525257 ZNF568Q3ZCX4 644 aa26.29■■□□□ 1.8
USP47-205ENST00000525257 CCDC83Q8IWF9 413 aa26.29■■□□□ 1.8
USP47-205ENST00000525257 OSBPL6Q9BZF3 934 aa26.29■■□□□ 1.8
USP47-205ENST00000525257 PLA2G2FQ9BZM2 168 aa26.29■■□□□ 1.8
USP47-205ENST00000525257 FOXP1Q9H334 677 aaPredicted RBP26.29■■□□□ 1.8
USP47-205ENST00000525257 TOPORSQ9NS56 1045 aaPredicted RBP26.29■■□□□ 1.8
USP47-205ENST00000525257 DDX19AQ9NUU7 478 aaKnown RBP26.29■■□□□ 1.8
USP47-205ENST00000525257 LRWD1Q9UFC0 647 aa26.29■■□□□ 1.8
USP47-205ENST00000525257 GPR179Q6PRD1 2367 aa26.29■■□□□ 1.8
USP47-205ENST00000525257 PHLPP2Q6ZVD8 1323 aa26.29■■□□□ 1.8
USP47-205ENST00000525257 LRG1P02750 347 aa26.28■■□□□ 1.8
USP47-205ENST00000525257 FXR2P51116 673 aaKnown RBP eCLIP26.28■■□□□ 1.87e-7■■■■□ 24.6
USP47-205ENST00000525257 ARPP19P56211 112 aa26.28■■□□□ 1.8
USP47-205ENST00000525257 PEX3P56589 373 aa26.28■■□□□ 1.8
USP47-205ENST00000525257 CSTF1Q05048 431 aaKnown RBP26.28■■□□□ 1.8
USP47-205ENST00000525257 GNL2Q13823 731 aaKnown RBP26.28■■□□□ 1.8
USP47-205ENST00000525257 VARS2Q5ST30 1063 aaKnown RBP26.28■■□□□ 1.8
USP47-205ENST00000525257 POTEHQ6S545 545 aa26.28■■□□□ 1.8
USP47-205ENST00000525257 SUMF1Q8NBK3 374 aa26.28■■□□□ 1.8
USP47-205ENST00000525257 ACO2Q99798 780 aaKnown RBP26.28■■□□□ 1.8
USP47-205ENST00000525257 GDE1Q9NZC3 331 aa26.28■■□□□ 1.8
USP47-205ENST00000525257 FBXO4Q9UKT5 387 aa26.28■■□□□ 1.8
USP47-205ENST00000525257 WDR27A2RRH5 827 aa26.27■■□□□ 1.8
USP47-205ENST00000525257 PODXLO00592 558 aa26.27■■□□□ 1.8
USP47-205ENST00000525257 PRRG1O14668 218 aa26.27■■□□□ 1.8
USP47-205ENST00000525257 ECI2O75521 394 aa26.27■■□□□ 1.8
USP47-205ENST00000525257 TARSP26639 723 aaKnown RBP26.27■■□□□ 1.8
USP47-205ENST00000525257 ELF1P32519 619 aa26.27■■□□□ 1.8
USP47-205ENST00000525257 NPTX2P47972 431 aa26.27■■□□□ 1.8
USP47-205ENST00000525257 ZNF528Q3MIS6 628 aa26.27■■□□□ 1.8
USP47-205ENST00000525257 SLC8B1Q6J4K2 584 aa26.27■■□□□ 1.8
USP47-205ENST00000525257 ALKAL1Q6UXT8 129 aa26.27■■□□□ 1.8
USP47-205ENST00000525257 DGLUCYQ7Z3D6 616 aa26.27■■□□□ 1.8
USP47-205ENST00000525257 ZNF461Q8TAF7 563 aa26.27■■□□□ 1.8
USP47-205ENST00000525257 SNX29Q8TEQ0 813 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms