RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 CXorf57Q6NSI4 855 aaKnown RBP5.66□□□□□ -1.5
CD44-215ENST00000525241 ZNF529Q6P280 563 aa5.66□□□□□ -1.5
CD44-215ENST00000525241 SLC35G2Q8TBE7 412 aa5.66□□□□□ -1.5
CD44-215ENST00000525241 LRGUKQ96M69 825 aa5.66□□□□□ -1.5
CD44-215ENST00000525241 MAP3K14Q99558 947 aa5.66□□□□□ -1.5
CD44-215ENST00000525241 VRK1Q99986 396 aaPredicted RBP5.66□□□□□ -1.5
CD44-215ENST00000525241 NDC1Q9BTX1 674 aa5.66□□□□□ -1.5
CD44-215ENST00000525241 C11orf54Q9H0W9 315 aaPredicted RBP5.66□□□□□ -1.5
CD44-215ENST00000525241 AURKAIP1Q9NWT8 199 aaPredicted RBP5.66□□□□□ -1.5
CD44-215ENST00000525241 POGKQ9P215 609 aa5.66□□□□□ -1.5
CD44-215ENST00000525241 DRGXA6NNA5 263 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 LEFTY2O00292 366 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 PARNO95453 639 aaKnown RBP5.65□□□□□ -1.5
CD44-215ENST00000525241 MALP21145 153 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 MGAT1P26572 445 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 SNAPC2Q13487 334 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 TOB2Q14106 344 aaPredicted RBP5.65□□□□□ -1.5
CD44-215ENST00000525241 UBXN2BQ14CS0 331 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 KHDC1Q4VXA5 237 aaKnown RBP5.65□□□□□ -1.5
CD44-215ENST00000525241 GADL1Q6ZQY3 521 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 RNF207Q6ZRF8 634 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 UBE3BQ7Z3V4 1068 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 C1orf210Q8IVY1 113 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 GRAMD1CQ8IYS0 662 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 MAGEB6Q8N7X4 407 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 DIS3LQ8TF46 1054 aaKnown RBP5.65□□□□□ -1.5
CD44-215ENST00000525241 CLIP3Q96DZ5 547 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 ZNF703Q9H7S9 590 aaPredicted RBP5.65□□□□□ -1.5
CD44-215ENST00000525241 NMRK2Q9NPI5 230 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 FBXO34Q9NWN3 711 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 CEP72Q9P209 647 aa5.65□□□□□ -1.5
CD44-215ENST00000525241 TCRBV7S2A1N4TA0A589 114 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 SLC16A6O15403 523 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 POMCP01189 267 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 AMHP03971 560 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 ALDH2P05091 517 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 SBK3P0C264 359 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 HSPA6P17066 643 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 SLC6A4P31645 630 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 APOBEC3AP31941 199 aaPredicted RBP5.64□□□□□ -1.51
CD44-215ENST00000525241 MAP2K6P52564 334 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 CHN2P52757 468 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 HK3P52790 923 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 NHLH2Q02577 135 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 NRN1LQ496H8 165 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 THEMIS2Q5TEJ8 643 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 SPRED1Q7Z699 444 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 FMNL3Q8IVF7 1028 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 C3orf20Q8ND61 904 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 SH3RF3Q8TEJ3 882 aaPredicted RBP5.64□□□□□ -1.51
CD44-215ENST00000525241 RGMAQ96B86 450 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 C1GALT1C1Q96EU7 318 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 TAAR9Q96RI9 348 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 GPR20Q99678 358 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 POLHQ9Y253 713 aa5.64□□□□□ -1.51
CD44-215ENST00000525241 NT5C1B-RDH14C9J2C7 533 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 KIAA0391O15091 583 aaKnown RBP5.63□□□□□ -1.51
CD44-215ENST00000525241 GRM6O15303 877 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 U2AF1L5P0DN76 240 aaPredicted RBP5.63□□□□□ -1.51
CD44-215ENST00000525241 SLC6A2P23975 617 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 SLC25A3Q00325 362 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 U2AF1Q01081 240 aaKnown RBP eCLIP5.63□□□□□ -1.51
CD44-215ENST00000525241 CREMQ03060 361 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 NOGQ13253 232 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 MLC1Q15049 377 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 PABPC1LQ4VXU2 614 aaKnown RBP5.63□□□□□ -1.51
CD44-215ENST00000525241 RABL3Q5HYI8 236 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 LCE1DQ5T752 114 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 FAM102AQ5T9C2 384 aaPredicted RBP5.63□□□□□ -1.51
CD44-215ENST00000525241 MED25Q71SY5 747 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 MYO1HQ8N1T3 1032 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 IL17RDQ8NFM7 739 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 NEU1Q99519 415 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 GSTO2Q9H4Y5 243 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 SORCS3Q9UPU3 1222 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 PCDHA3Q9Y5H8 950 aa5.63□□□□□ -1.51
CD44-215ENST00000525241 AHRRA9YTQ3 701 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 F2RL2O00254 374 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 TRIM24O15164 1050 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 PRSS23O95084 383 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 FTLP02792 175 aaPredicted RBP5.62□□□□□ -1.51
CD44-215ENST00000525241 CD1AP06126 327 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 C1SP09871 688 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 MTHFD1P11586 935 aaKnown RBP5.62□□□□□ -1.51
CD44-215ENST00000525241 ATP2B3Q16720 1220 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 FLYWCH1Q4VC44 716 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 SLC4A10Q6U841 1118 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 HEATR3Q7Z4Q2 680 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 ZFPM1Q8IX07 1006 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 RUNDC1Q96C34 613 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 CGRRF1Q99675 332 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 ACO2Q99798 780 aaKnown RBP5.62□□□□□ -1.51
CD44-215ENST00000525241 KMT5AQ9NQR1 393 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 MAN1C1Q9NR34 630 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 EIF2B4Q9UI10 523 aaKnown RBP5.62□□□□□ -1.51
CD44-215ENST00000525241 CHST2Q9Y4C5 530 aa5.62□□□□□ -1.51
CD44-215ENST00000525241 H3BML4 177 aa5.61□□□□□ -1.51
CD44-215ENST00000525241 ZNF185O15231 689 aa5.61□□□□□ -1.51
CD44-215ENST00000525241 FAM20BO75063 409 aa5.61□□□□□ -1.51
CD44-215ENST00000525241 SCAF4O95104 1147 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms