RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 SGPL1O95470 568 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 TMEM191BP0C7N4 346 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 GZMAP12544 262 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 CYP11B1P15538 503 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 TMOD1P28289 359 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 NSFP46459 744 aaKnown RBP11.55□□□□□ -0.56
SPIDR-222ENST00000524006 INHBEP58166 350 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 LAMTOR4Q0VGL1 99 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 CASP8Q14790 479 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 PLCB4Q15147 1175 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 TARBP2Q15633 366 aaKnown RBP11.55□□□□□ -0.56
SPIDR-222ENST00000524006 ZNF484Q5JVG2 852 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 GPAT2Q6NUI2 795 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 TAS1R3Q7RTX0 852 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 DPP9Q86TI2 863 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 NOP9Q86U38 636 aaKnown RBP11.55□□□□□ -0.56
SPIDR-222ENST00000524006 TRIM50Q86XT4 487 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 RHPN2Q8IUC4 686 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 BRSK2Q8IWQ3 736 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 KLHL7Q8IXQ5 586 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 LRRC57Q8N9N7 239 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 USP38Q8NB14 1042 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 RNF149Q8NC42 400 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 CCDC26Q8TAB7 109 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 ACTRT1Q8TDG2 376 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 SEMA4DQ92854 862 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 KCNN1Q92952 543 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 MS4A14Q96JA4 679 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 KREMEN1Q96MU8 473 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 PCYT2Q99447 389 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 KRT12Q99456 494 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.55□□□□□ -0.562e-7■■□□□ 11.4
SPIDR-222ENST00000524006 FUT8Q9BYC5 575 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 INO80BQ9C086 356 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-222ENST00000524006 VIPAS39Q9H9C1 493 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 EFCC1Q9HA90 598 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 PDE11AQ9HCR9 933 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 SMARCAL1Q9NZC9 954 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 RASAL2Q9UJF2 1139 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 PCDHB4Q9Y5E5 795 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 STYXL1Q9Y6J8 313 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 TRIP11Q15643 1979 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 COL1A2P08123 1366 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 A0A0B4J269 797 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 OGTO15294 1046 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 POLR3GO15318 223 aaPredicted RBP11.54□□□□□ -0.56
SPIDR-222ENST00000524006 MAGEB2O15479 319 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 STRNO43815 780 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 HSF2BPO75031 334 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 ARIH2O95376 493 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 MMEP08473 750 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 MYBL1P10243 752 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 CYP2C8P10632 490 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 TNFRSF8P28908 595 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 ADORA2AP29274 412 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 RNASE9P60153 205 aaKnown RBP11.54□□□□□ -0.56
SPIDR-222ENST00000524006 FAM193AP78312 1265 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 NOP14P78316 857 aaKnown RBP11.54□□□□□ -0.56
SPIDR-222ENST00000524006 IGBP1P78318 339 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 CAP1Q01518 475 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 HLTFQ14527 1009 aaKnown RBP eCLIP11.54□□□□□ -0.562e-7■□□□□ 8.5
SPIDR-222ENST00000524006 ZACNQ401N2 412 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 LMBRD2Q68DH5 695 aaPredicted RBP11.54□□□□□ -0.56
SPIDR-222ENST00000524006 CDCA2Q69YH5 1023 aaPredicted RBP11.54□□□□□ -0.56
SPIDR-222ENST00000524006 EMBQ6PCB8 327 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 ZNF771Q7L3S4 317 aaPredicted RBP11.54□□□□□ -0.56
SPIDR-222ENST00000524006 ANKRD23Q86SG2 305 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 NT5DC3Q86UY8 548 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 SLC47A2Q86VL8 602 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 WDR49Q8IV35 697 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 ABRAQ8N0Z2 381 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 LRRC71Q8N4P6 559 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 ZNF564Q8TBZ8 553 aaPredicted RBP11.54□□□□□ -0.56
SPIDR-222ENST00000524006 KAT5Q92993 513 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 ANKRD36BP1Q96IX9 119 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 PTPN18Q99952 460 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 LRRC1Q9BTT6 524 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 PI4K2AQ9BTU6 479 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 NUP85Q9BW27 656 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 MED4Q9NPJ6 270 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 EHD2Q9NZN4 543 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 UVRAGQ9P2Y5 699 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 NOCTQ9UK39 431 aaKnown RBP11.54□□□□□ -0.56
SPIDR-222ENST00000524006 GTF3C4Q9UKN8 822 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 AKT3Q9Y243 479 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 TRIM17Q9Y577 477 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 CEP83Q9Y592 693 aa11.54□□□□□ -0.56
SPIDR-222ENST00000524006 ZEB2O60315 1214 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 ZMYND10O75800 440 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 ERLIN2O94905 339 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 IL18RAPO95256 599 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 HADHBP55084 474 aaKnown RBP11.53□□□□□ -0.56
SPIDR-222ENST00000524006 GUCY2DQ02846 1103 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 TNFAIP2Q03169 654 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 CRHR2Q13324 411 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 CUL2Q13617 745 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 NCOA4Q13772 614 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 MESDQ14696 234 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 HSDL1Q3SXM5 330 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 ATF7IP2Q5U623 682 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms