RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 JADE1Q6IE81 842 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 CBWD2Q8IUF1 395 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 ELOA2Q8IYF1 753 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-224ENST00000523873 GPD1LQ8N335 351 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 SPATA20Q8TB22 786 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 KIF12Q96FN5 646 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 TMEM169Q96HH4 297 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 GSDMAQ96QA5 445 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 RMND1Q9NWS8 449 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 TSC2P49815 1807 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 MTCL1Q9Y4B5 1905 aaKnown RBP13.94□□□□□ -0.18
VEGFA-224ENST00000523873 KIF4AO95239 1232 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 ADRB2P07550 413 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 PRCPP42785 496 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 CLCNKBP51801 687 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 ZNF658Q5TYW1 1059 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-224ENST00000523873 PLPP4Q5VZY2 271 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 HS2ST1Q7LGA3 356 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 ADGRD2Q7Z7M1 963 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 BRSK2Q8IWQ3 736 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 EFCAB13Q8IY85 973 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 RDH13Q8NBN7 331 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 AUTS2Q8WXX7 1259 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 MRPL38Q96DV4 380 aaKnown RBP13.94□□□□□ -0.18
VEGFA-224ENST00000523873 COLEC11Q9BWP8 271 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 LMAN2LQ9H0V9 348 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 CLSTN2Q9H4D0 955 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 PLEKHA5Q9HAU0 1116 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 TLR9Q9NR96 1032 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 RBAKQ9NYW8 714 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-224ENST00000523873 STXBP5LQ9Y2K9 1186 aa13.94□□□□□ -0.18
VEGFA-224ENST00000523873 GOLGA6L22H0YM25 854 aa13.93□□□□□ -0.18
VEGFA-224ENST00000523873 FSCN2O14926 492 aa13.93□□□□□ -0.18
VEGFA-224ENST00000523873 LDHAP00338 332 aaKnown RBP13.93□□□□□ -0.18
VEGFA-224ENST00000523873 BMP6P22004 513 aa13.93□□□□□ -0.18
VEGFA-224ENST00000523873 CA8P35219 290 aa13.93□□□□□ -0.18
VEGFA-224ENST00000523873 KRT17Q04695 432 aa13.93□□□□□ -0.18
VEGFA-224ENST00000523873 HSP90AA2PQ14568 343 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-224ENST00000523873 PTPROQ16827 1216 aa13.93□□□□□ -0.18
VEGFA-224ENST00000523873 TCEAL5Q5H9L2 206 aa13.93□□□□□ -0.18
VEGFA-224ENST00000523873 LMBRD2Q68DH5 695 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-224ENST00000523873 CD300LGQ6UXG3 332 aa13.93□□□□□ -0.18
VEGFA-224ENST00000523873 TAS1R1Q7RTX1 841 aa13.93□□□□□ -0.18
VEGFA-224ENST00000523873 GUF1Q8N442 669 aaKnown RBP13.93□□□□□ -0.18
VEGFA-224ENST00000523873 C3orf58Q8NDZ4 430 aa13.93□□□□□ -0.18
VEGFA-224ENST00000523873 MAFAQ8NHW3 353 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-224ENST00000523873 MICAL1Q8TDZ2 1067 aa13.93□□□□□ -0.18
VEGFA-224ENST00000523873 B3GALT6Q96L58 329 aa13.93□□□□□ -0.18
VEGFA-224ENST00000523873 TCF25Q9BQ70 676 aa13.93□□□□□ -0.18
VEGFA-224ENST00000523873 PDE11AQ9HCR9 933 aa13.93□□□□□ -0.18
VEGFA-224ENST00000523873 I3L4J1 428 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 PODXLO00592 558 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 PPEF2O14830 753 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 NR3C1P04150 777 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
VEGFA-224ENST00000523873 POU3F3P20264 500 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-224ENST00000523873 GTF2F1P35269 517 aaKnown RBP eCLIP13.92□□□□□ -0.183e-11■■■■■ 42.3
VEGFA-224ENST00000523873 BRCC3P46736 316 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 CASP4P49662 377 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 UBE3AQ05086 875 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 MORC3Q14149 939 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 TMEM132DQ14C87 1099 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 ZBTB6Q15916 424 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 UPP1Q16831 310 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 SCARA3Q6AZY7 606 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 FUT10Q6P4F1 479 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 DDX53Q86TM3 631 aaKnown RBP13.92□□□□□ -0.18
VEGFA-224ENST00000523873 VPS52Q8N1B4 723 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 XXYLT1Q8NBI6 393 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 GPR62Q9BZJ7 368 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 ZBP1Q9H171 429 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 PRDM6Q9NQX0 595 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 ENTPD7Q9NQZ7 604 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 SLC38A7Q9NVC3 462 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 PUF60Q9UHX1 559 aaKnown RBP13.92□□□□□ -0.18
VEGFA-224ENST00000523873 ADAM28Q9UKQ2 775 aa13.92□□□□□ -0.18
VEGFA-224ENST00000523873 UBQLN1Q9UMX0 589 aaKnown RBP13.92□□□□□ -0.18
VEGFA-224ENST00000523873 PTPRJQ12913 1337 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 TRIM49BA6NDI0 452 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 ZNF233A6NK53 670 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 HIDE1A8MVS5 230 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 PDXKO00764 312 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 C2CD2LO14523 706 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 KIAA0391O15091 583 aaKnown RBP13.91□□□□□ -0.18
VEGFA-224ENST00000523873 CALUO43852 315 aaPredicted RBP13.91□□□□□ -0.18
VEGFA-224ENST00000523873 EXOC3O60645 756 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 TADA2AO75478 443 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 B3GAT3O94766 335 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 KIF20AO95235 890 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 EFEMP2O95967 443 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 PMS1P54277 932 aaKnown RBP13.91□□□□□ -0.18
VEGFA-224ENST00000523873 SNRPFP62306 86 aaKnown RBP13.91□□□□□ -0.18
VEGFA-224ENST00000523873 SNRNP35Q16560 246 aaKnown RBP13.91□□□□□ -0.18
VEGFA-224ENST00000523873 TMC7Q7Z402 723 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 RBM23Q86U06 439 aaKnown RBP13.91□□□□□ -0.18
VEGFA-224ENST00000523873 CD302Q8IX05 232 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 C12orf56Q8IXR9 622 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 RNF168Q8IYW5 571 aaPredicted RBP13.91□□□□□ -0.18
VEGFA-224ENST00000523873 FBXL18Q96ME1 805 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 HERC2P3Q9BVR0 1158 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms