RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 GLB1LQ6UWU2 654 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 FAM186BQ8IYM0 893 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 MKNK1Q9BUB5 465 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 CCDC94Q9BW85 323 aaPredicted RBP12.96□□□□□ -0.33
PVT1-215ENST00000522963 RBSNQ9H1K0 784 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 THAP9Q9H5L6 903 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 KIAA1586Q9HCI6 787 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 PARP2Q9UGN5 583 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 FRMD4BQ9Y2L6 1034 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 RWDD3Q9Y3V2 267 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 SZT2Q5T011 3432 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 ZNF233A6NK53 670 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 MAPK13O15264 365 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 RECQL4O94761 1208 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 CXCL8P10145 99 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 EPB41P11171 864 aaKnown RBP12.95□□□□□ -0.34
PVT1-215ENST00000522963 ZNF18P17022 549 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 AKAP5P24588 427 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 PBX3P40426 434 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 CYP24A1Q07973 514 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 SKIV2LQ15477 1246 aaKnown RBP12.95□□□□□ -0.34
PVT1-215ENST00000522963 ENOX2Q16206 610 aaKnown RBP12.95□□□□□ -0.34
PVT1-215ENST00000522963 KYAT1Q16773 422 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 AGMOQ6ZNB7 445 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 BRSK2Q8IWQ3 736 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 LRRC43Q8N309 656 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 URGCPQ8TCY9 931 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 PLEKHO2Q8TD55 490 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 CLP1Q92989 425 aaKnown RBP12.95□□□□□ -0.34
PVT1-215ENST00000522963 BORCS6Q96GS4 357 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 CNOT6LQ96LI5 555 aaKnown RBP12.95□□□□□ -0.34
PVT1-215ENST00000522963 MFSD14AQ96MC6 490 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 ACAP3Q96P50 834 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 RPF1Q9H9Y2 349 aaKnown RBP12.95□□□□□ -0.34
PVT1-215ENST00000522963 RSAD1Q9HA92 442 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 ALG13Q9NP73 1137 aaKnown RBP12.95□□□□□ -0.34
PVT1-215ENST00000522963 AAASQ9NRG9 546 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 RBAKQ9NYW8 714 aaPredicted RBP12.95□□□□□ -0.34
PVT1-215ENST00000522963 PCDHB12Q9Y5F1 795 aa12.95□□□□□ -0.34
PVT1-215ENST00000522963 LAMA2P24043 3122 aaKnown RBP12.94□□□□□ -0.34
PVT1-215ENST00000522963 LACTBL1A8MY62 500 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 H3BNC9 293 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 LPXNO60711 386 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 OFD1O75665 1012 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 GNA14O95837 355 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 POMCP01189 267 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 RB1P06400 928 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 LINC00271P0C7V0 271 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 POU5F1Q01860 360 aaKnown RBP12.94□□□□□ -0.34
PVT1-215ENST00000522963 HSP90AA2PQ14568 343 aaPredicted RBP12.94□□□□□ -0.34
PVT1-215ENST00000522963 SLC10A6Q3KNW5 377 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 CCDC40Q4G0X9 1142 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 NOMO2Q5JPE7 1267 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 HACE1Q8IYU2 909 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 KLHL23Q8NBE8 558 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 COLGALT1Q8NBJ5 622 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 FAM193BQ96PV7 902 aaPredicted RBP12.94□□□□□ -0.34
PVT1-215ENST00000522963 C11orf84Q9BUA3 381 aaPredicted RBP12.94□□□□□ -0.34
PVT1-215ENST00000522963 MRPL9Q9BYD2 267 aaKnown RBP12.94□□□□□ -0.34
PVT1-215ENST00000522963 CXCL16Q9H2A7 254 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 CWH43Q9H720 699 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 KLK14Q9P0G3 267 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 MTCH2Q9Y6C9 303 aa12.94□□□□□ -0.34
PVT1-215ENST00000522963 TTC26A0AVF1 554 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 KCNJ18B7U540 433 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 NT5C1B-RDH14C9J2C7 533 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 GOLGA6L19H0YKK7 550 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 GRM6O15303 877 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 ZC3H11AO75152 810 aaKnown RBP eCLIP12.93□□□□□ -0.34
PVT1-215ENST00000522963 ATP1A3P13637 1013 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 LAG3P18627 525 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 MLH1P40692 756 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 YARSP54577 528 aaKnown RBP12.93□□□□□ -0.34
PVT1-215ENST00000522963 MARSP56192 900 aaKnown RBP12.93□□□□□ -0.34
PVT1-215ENST00000522963 MCCD1P59942 119 aaPredicted RBP12.93□□□□□ -0.34
PVT1-215ENST00000522963 KCNJ12Q14500 433 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 PSMD6Q15008 389 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 PTPROQ16827 1216 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 TCP11X2Q5H9J9 407 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 ALKAL1Q6UXT8 129 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 INTS8Q75QN2 995 aaKnown RBP12.93□□□□□ -0.34
PVT1-215ENST00000522963 FRMD5Q7Z6J6 570 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 CREBRFQ8IUR6 639 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 FAM114A1Q8IWE2 563 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 FAM212AQ96EL1 285 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 SNX27Q96L92 541 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 ZNF558Q96NG5 402 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 GAD1Q99259 594 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 METTL14Q9HCE5 456 aaKnown RBP12.93□□□□□ -0.34
PVT1-215ENST00000522963 PDE11AQ9HCR9 933 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 TBC1D13Q9NVG8 400 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 MAGEC2Q9UBF1 373 aaPredicted RBP12.93□□□□□ -0.34
PVT1-215ENST00000522963 ARMCX3Q9UH62 379 aaPredicted RBP12.93□□□□□ -0.34
PVT1-215ENST00000522963 GIT1Q9Y2X7 761 aa12.93□□□□□ -0.34
PVT1-215ENST00000522963 TDRD15B5MCY1 1934 aaKnown RBP12.93□□□□□ -0.34
PVT1-215ENST00000522963 TRIP11Q15643 1979 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 C5orf67F2Z3F1 127 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 TULP1O00294 542 aaPredicted RBP12.92□□□□□ -0.34
PVT1-215ENST00000522963 ITGB1P05556 798 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 TRIM49P0CI25 452 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms