RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 IGSF21Q96ID5 467 aa13.58□□□□□ -0.24
HDAC2-211ENST00000521233 FBXL18Q96ME1 805 aa13.58□□□□□ -0.24
HDAC2-211ENST00000521233 COLEC11Q9BWP8 271 aa13.58□□□□□ -0.24
HDAC2-211ENST00000521233 PCIF1Q9H4Z3 704 aa13.58□□□□□ -0.24
HDAC2-211ENST00000521233 MIOSQ9NXC5 875 aa13.58□□□□□ -0.24
HDAC2-211ENST00000521233 LMCD1Q9NZU5 365 aa13.58□□□□□ -0.24
HDAC2-211ENST00000521233 DNAJB4Q9UDY4 337 aa13.58□□□□□ -0.24
HDAC2-211ENST00000521233 FAN1Q9Y2M0 1017 aa13.58□□□□□ -0.24
HDAC2-211ENST00000521233 PDCD11Q14690 1871 aaKnown RBP13.58□□□□□ -0.24
HDAC2-211ENST00000521233 EPOPA6NHQ4 379 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 LACTBL1A8MY62 500 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 CLIC2O15247 247 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 B4GALT3O60512 393 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 NR3C1P04150 777 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 ITGB1P05556 798 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 FOSL2P15408 326 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 RPL9P32969 192 aaKnown RBP13.57□□□□□ -0.24
HDAC2-211ENST00000521233 PBX3P40426 434 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 LRRC63Q05C16 580 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 BMS1Q14692 1282 aaKnown RBP13.57□□□□□ -0.24
HDAC2-211ENST00000521233 NAB2Q15742 525 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 SNRNP35Q16560 246 aaKnown RBP13.57□□□□□ -0.24
HDAC2-211ENST00000521233 ZCWPW2Q504Y3 356 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 TIGD5Q53EQ6 642 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 CRELD2Q6UXH1 353 aaPredicted RBP13.57□□□□□ -0.24
HDAC2-211ENST00000521233 USP37Q86T82 979 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 SMYD4Q8IYR2 804 aaPredicted RBP13.57□□□□□ -0.24
HDAC2-211ENST00000521233 ADSSL1Q8N142 457 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 BEST2Q8NFU1 509 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 SYAP1Q96A49 352 aaPredicted RBP13.57□□□□□ -0.24
HDAC2-211ENST00000521233 MRPL38Q96DV4 380 aaKnown RBP13.57□□□□□ -0.24
HDAC2-211ENST00000521233 FAM212AQ96EL1 285 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 DHTKD1Q96HY7 919 aaPredicted RBP13.57□□□□□ -0.24
HDAC2-211ENST00000521233 CDX2Q99626 313 aaPredicted RBP13.57□□□□□ -0.24
HDAC2-211ENST00000521233 MAPK8IP1Q9UQF2 711 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 FRMD4BQ9Y2L6 1034 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 PRG3Q9Y2Y8 225 aaPredicted RBP13.57□□□□□ -0.24
HDAC2-211ENST00000521233 TRANK1O15050 2925 aa13.57□□□□□ -0.24
HDAC2-211ENST00000521233 CHD7Q9P2D1 2997 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 BICDL2A1A5D9 508 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 GOLGA8IPA6NC78 632 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 CASTOR2A6NHX0 329 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 GOLGA8JA6NMD2 632 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 TMEM189-UBE2V1I3L0A0 370 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 BIN1O00499 593 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 NRP1O14786 923 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 MEFVO15553 781 aaPredicted RBP13.56□□□□□ -0.24
HDAC2-211ENST00000521233 POU3F3P20264 500 aaPredicted RBP13.56□□□□□ -0.24
HDAC2-211ENST00000521233 PAX3P23760 479 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 NR2F2P24468 414 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 PRCPP42785 496 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 ELAVL2Q12926 359 aaKnown RBP13.56□□□□□ -0.24
HDAC2-211ENST00000521233 CCDC183Q5T5S1 534 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 JADE1Q6IE81 842 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 PDE12Q6L8Q7 609 aaKnown RBP13.56□□□□□ -0.24
HDAC2-211ENST00000521233 FOXR2Q6PJQ5 311 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 DDX53Q86TM3 631 aaKnown RBP13.56□□□□□ -0.24
HDAC2-211ENST00000521233 CBWD2Q8IUF1 395 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 PPP2R3CQ969Q6 453 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 ZMAT2Q96NC0 199 aaKnown RBP13.56□□□□□ -0.24
HDAC2-211ENST00000521233 GUCD1Q96NT3 240 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 TLR9Q9NR96 1032 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 DACH1Q9UI36 760 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 ADAM28Q9UKQ2 775 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 MYO9BQ13459 2157 aa13.56□□□□□ -0.24
HDAC2-211ENST00000521233 SF3B1O75533 1304 aaKnown RBP eCLIP13.56□□□□□ -0.24
HDAC2-211ENST00000521233 PODXLO00592 558 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 MAPK13O15264 365 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 TRAPPC3O43617 180 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 LPXNO60711 386 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 NFICP08651 508 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 CCNE1P24864 410 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 CYP24A1Q07973 514 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 PAK1Q13153 545 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 PSMD6Q15008 389 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 CENPPQ6IPU0 288 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 MLKLQ8NB16 471 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 SPPL3Q8TCT6 385 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 CACTINQ8WUQ7 758 aaKnown RBP13.55□□□□□ -0.24
HDAC2-211ENST00000521233 MYLIPQ8WY64 445 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 FNBP1Q96RU3 617 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 ALG13Q9NP73 1137 aaKnown RBP13.55□□□□□ -0.24
HDAC2-211ENST00000521233 DMAC2Q9NW81 257 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 MARCH5Q9NX47 278 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 TUBGCP4Q9UGJ1 667 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 ANK1P16157 1881 aa13.55□□□□□ -0.24
HDAC2-211ENST00000521233 TRIP11Q15643 1979 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 FSD2A1L4K1 749 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 NT5C1B-RDH14C9J2C7 533 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 CETN3O15182 167 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 GRM6O15303 877 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 SLC16A3O15427 465 aaKnown RBP13.54□□□□□ -0.24
HDAC2-211ENST00000521233 KIF4AO95239 1232 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 TMEM191BP0C7N4 346 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 IGFBP4P22692 258 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 LRPAP1P30533 357 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 SOX4Q06945 474 aaPredicted RBP13.54□□□□□ -0.24
HDAC2-211ENST00000521233 ZBTB6Q15916 424 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 UPP1Q16831 310 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 SPATA1Q5VX52 437 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms