RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 KLC2Q9H0B6 622 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 ANLNQ9NQW6 1124 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 ST6GALNAC2Q9UJ37 374 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 MUSKO15146 869 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 MARCH6O60337 910 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 POMCP01189 267 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 FTLP02792 175 aaPredicted RBP4.75□□□□□ -1.65
VPS13B-207ENST00000518569 MTHFD1P11586 935 aaKnown RBP4.75□□□□□ -1.65
VPS13B-207ENST00000518569 MAN2A2P49641 1150 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 MAP2K6P52564 334 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 CREMQ03060 361 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 ZNF267Q14586 743 aaPredicted RBP4.75□□□□□ -1.65
VPS13B-207ENST00000518569 R3HDM1Q15032 1099 aaKnown RBP4.75□□□□□ -1.65
VPS13B-207ENST00000518569 KHDC1Q4VXA5 237 aaKnown RBP4.75□□□□□ -1.65
VPS13B-207ENST00000518569 PABPC1LQ4VXU2 614 aaKnown RBP4.75□□□□□ -1.65
VPS13B-207ENST00000518569 ATXN7L2Q5T6C5 722 aaPredicted RBP4.75□□□□□ -1.65
VPS13B-207ENST00000518569 C1QL3Q5VWW1 255 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 XYLT1Q86Y38 959 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 DENND1CQ8IV53 801 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 GRAMD1CQ8IYS0 662 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 FBXO18Q8NFZ0 1043 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 NLGN4YQ8NFZ3 816 aaPredicted RBP4.75□□□□□ -1.65
VPS13B-207ENST00000518569 TFAP2CQ92754 450 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 C8orf49Q96NF6 230 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 FAM193BQ96PV7 902 aaPredicted RBP4.75□□□□□ -1.65
VPS13B-207ENST00000518569 ADOQ96SZ5 270 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 MNTQ99583 582 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 GPR20Q99678 358 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 CPEB1Q9BZB8 566 aaKnown RBP4.75□□□□□ -1.65
VPS13B-207ENST00000518569 C11orf54Q9H0W9 315 aaPredicted RBP4.75□□□□□ -1.65
VPS13B-207ENST00000518569 C1orf112Q9NSG2 853 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 SIDT1Q9NXL6 827 aaKnown RBP4.75□□□□□ -1.65
VPS13B-207ENST00000518569 SLC23A1Q9UHI7 598 aa4.75□□□□□ -1.65
VPS13B-207ENST00000518569 XDHP47989 1333 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 PNPLA7Q6ZV29 1317 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 KLRG2A4D1S0 409 aaPredicted RBP4.74□□□□□ -1.65
VPS13B-207ENST00000518569 DIRC3C9JPN6 131 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 KIF3BO15066 747 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 CTNND1O60716 968 aaKnown RBP4.74□□□□□ -1.65
VPS13B-207ENST00000518569 ALAS1P13196 640 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 INSRRP14616 1297 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 MALP21145 153 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 ACRV1P26436 265 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 ZNF280AP59817 542 aaPredicted RBP4.74□□□□□ -1.65
VPS13B-207ENST00000518569 ADAM17P78536 824 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 NOGQ13253 232 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 PUM1Q14671 1186 aaKnown RBP eCLIP4.74□□□□□ -1.65
VPS13B-207ENST00000518569 UBXN2BQ14CS0 331 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 ZXDCQ2QGD7 858 aaPredicted RBP4.74□□□□□ -1.65
VPS13B-207ENST00000518569 HSP90AB2PQ58FF8 381 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 ZNF585AQ6P3V2 769 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 WDR75Q8IWA0 830 aaKnown RBP4.74□□□□□ -1.65
VPS13B-207ENST00000518569 MB21D1Q8N884 522 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 DCBLD1Q8N8Z6 715 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 IL17RDQ8NFM7 739 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 CDK5RAP3Q96JB5 506 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 LRGUKQ96M69 825 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 NDC1Q9BTX1 674 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 GPR87Q9BY21 358 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 KRTAP3-1Q9BYR8 98 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 TMPRSS5Q9H3S3 457 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 WDCPQ9H6R7 721 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 SPON1Q9HCB6 807 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 STXBP5LQ9Y2K9 1186 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 TSC22D4Q9Y3Q8 395 aa4.74□□□□□ -1.65
VPS13B-207ENST00000518569 NT5C1B-RDH14C9J2C7 533 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 ALDH2P05091 517 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 ATF3P18847 181 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 HK1P19367 917 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 SMARCA1P28370 1054 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 SCNN1GP51170 649 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 SNAPC2Q13487 334 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 CNGB1Q14028 1251 aaPredicted RBP4.73□□□□□ -1.65
VPS13B-207ENST00000518569 HLTFQ14527 1009 aaKnown RBP eCLIP4.73□□□□□ -1.65
VPS13B-207ENST00000518569 GBX1Q14549 363 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 CSRP2Q16527 193 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 CCDC181Q5TID7 509 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 ZNF529Q6P280 563 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 Q6ZRM9 215 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 C14orf80Q86SX3 495 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 RAB24Q969Q5 203 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 DCLRE1CQ96SD1 692 aaKnown RBP4.73□□□□□ -1.65
VPS13B-207ENST00000518569 CGRRF1Q99675 332 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 ACO2Q99798 780 aaKnown RBP4.73□□□□□ -1.65
VPS13B-207ENST00000518569 VRK1Q99986 396 aaPredicted RBP4.73□□□□□ -1.65
VPS13B-207ENST00000518569 ZNF703Q9H7S9 590 aaPredicted RBP4.73□□□□□ -1.65
VPS13B-207ENST00000518569 PRDM11Q9NQV5 511 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 GNL3LQ9NVN8 582 aaKnown RBP4.73□□□□□ -1.65
VPS13B-207ENST00000518569 POGKQ9P215 609 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 GABBR1Q9UBS5 961 aa4.73□□□□□ -1.65
VPS13B-207ENST00000518569 A0A088AWK7 358 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 DRGXA6NNA5 263 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 C1QTNF3-AMACRE9PGA6 284 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 GRM6O15303 877 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 TUSC2O75896 110 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 UBXN7O94888 489 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 TYRP14679 529 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 ZNF20P17024 532 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 RAP2BP61225 183 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 NKX6-1P78426 367 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms