RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 UBE2HP62256 183 aa23.92■■□□□ 1.42
VEGFA-217ENST00000518538 SNRPFP62306 86 aaKnown RBP23.92■■□□□ 1.42
VEGFA-217ENST00000518538 HYAL1Q12794 435 aa23.92■■□□□ 1.42
VEGFA-217ENST00000518538 CRELD2Q6UXH1 353 aaPredicted RBP23.92■■□□□ 1.42
VEGFA-217ENST00000518538 MRPL43Q8N983 215 aaKnown RBP23.92■■□□□ 1.42
VEGFA-217ENST00000518538 DDX27Q96GQ7 796 aaKnown RBP23.92■■□□□ 1.42
VEGFA-217ENST00000518538 HERC2P3Q9BVR0 1158 aa23.92■■□□□ 1.42
VEGFA-217ENST00000518538 GOLGA2P5Q9HBQ8 144 aa23.92■■□□□ 1.42
VEGFA-217ENST00000518538 HOOK1Q9UJC3 728 aaKnown RBP23.92■■□□□ 1.42
VEGFA-217ENST00000518538 TRIP11Q15643 1979 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 TMEM189-UBE2V1I3L0A0 370 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 TGFB1I1O43294 461 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 NCK2O43639 380 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 TADA2AO75478 443 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 SOD2P04179 222 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 CLCNKBP51801 687 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 PNOCQ13519 176 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 COL19A1Q14993 1142 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 ZBTB6Q15916 424 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 UPP1Q16831 310 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 KNOP1Q1ED39 458 aaKnown RBP23.91■■□□□ 1.42
VEGFA-217ENST00000518538 FUT10Q6P4F1 479 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 ELOA2Q8IYF1 753 aaPredicted RBP23.91■■□□□ 1.42
VEGFA-217ENST00000518538 C18orf25Q96B23 403 aaPredicted RBP23.91■■□□□ 1.42
VEGFA-217ENST00000518538 SAAL1Q96ER3 474 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 KIF12Q96FN5 646 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 FAM213AQ9BRX8 229 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 ASB7Q9H672 318 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 PRDM6Q9NQX0 595 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 AGPAT3Q9NRZ7 376 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 IRAK3Q9Y616 596 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 EYSQ5T1H1 3165 aa23.91■■□□□ 1.42
VEGFA-217ENST00000518538 SF3B1O75533 1304 aaKnown RBP eCLIP23.9■■□□□ 1.421e-17■■■■■ 34.8
VEGFA-217ENST00000518538 C2orf71A6NGG8 1288 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 HIDE1A8MVS5 230 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 EXTL3O43909 919 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 KINO60870 393 aaKnown RBP23.9■■□□□ 1.42
VEGFA-217ENST00000518538 CXCL14O95715 111 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 SPAG1Q07617 926 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 DCLRE1AQ6PJP8 1040 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 HS2ST1Q7LGA3 356 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 HASPINQ8TF76 798 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 HLA-CQ95604 372 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 FAM212AQ96EL1 285 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 CDCA3Q99618 268 aaPredicted RBP23.9■■□□□ 1.42
VEGFA-217ENST00000518538 GPR62Q9BZJ7 368 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 PCIF1Q9H4Z3 704 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 TLE6Q9H808 572 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 CGNQ9P2M7 1197 aaKnown RBP23.9■■□□□ 1.42
VEGFA-217ENST00000518538 THEGQ9P2T0 379 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 UBQLN1Q9UMX0 589 aaKnown RBP23.9■■□□□ 1.42
VEGFA-217ENST00000518538 COG5Q9UP83 839 aa23.9■■□□□ 1.42
VEGFA-217ENST00000518538 PDCD11Q14690 1871 aaKnown RBP23.9■■□□□ 1.42
VEGFA-217ENST00000518538 FSD2A1L4K1 749 aa23.89■■□□□ 1.41
VEGFA-217ENST00000518538 XPOTO43592 962 aaKnown RBP23.89■■□□□ 1.41
VEGFA-217ENST00000518538 B3GAT3O94766 335 aa23.89■■□□□ 1.41
VEGFA-217ENST00000518538 CYP3A5P20815 502 aa23.89■■□□□ 1.41
VEGFA-217ENST00000518538 RPL9P32969 192 aaKnown RBP23.89■■□□□ 1.41
VEGFA-217ENST00000518538 GTF2F1P35269 517 aaKnown RBP eCLIP23.89■■□□□ 1.413e-11■■■■■ 42.3
VEGFA-217ENST00000518538 NRIP1P48552 1158 aa23.89■■□□□ 1.41
VEGFA-217ENST00000518538 JADE1Q6IE81 842 aa23.89■■□□□ 1.41
VEGFA-217ENST00000518538 RBM23Q86U06 439 aaKnown RBP23.89■■□□□ 1.41
VEGFA-217ENST00000518538 GPD1LQ8N335 351 aa23.89■■□□□ 1.41
VEGFA-217ENST00000518538 ZSWIM2Q8NEG5 633 aa23.89■■□□□ 1.41
VEGFA-217ENST00000518538 PABPC5Q96DU9 382 aaKnown RBP23.89■■□□□ 1.41
VEGFA-217ENST00000518538 TUBGCP4Q9UGJ1 667 aa23.89■■□□□ 1.41
VEGFA-217ENST00000518538 DERAQ9Y315 318 aa23.89■■□□□ 1.41
VEGFA-217ENST00000518538 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.88■■□□□ 1.41
VEGFA-217ENST00000518538 PODXLO00592 558 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 PRPF40AO75400 957 aaKnown RBP23.88■■□□□ 1.41
VEGFA-217ENST00000518538 IL18RAPO95256 599 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 URODP06132 367 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 CA8P35219 290 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 ELAVL2Q12926 359 aaKnown RBP23.88■■□□□ 1.41
VEGFA-217ENST00000518538 PTPN14Q15678 1187 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 DUSP6Q16828 381 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 CTC1Q2NKJ3 1217 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 TAS1R1Q7RTX1 841 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 BRSK2Q8IWQ3 736 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 EFHBQ8N7U6 833 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 GOLGA5Q8TBA6 731 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 AUTS2Q8WXX7 1259 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 GSDMAQ96QA5 445 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 IGFLR1Q9H665 355 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 MRPL17Q9NRX2 175 aaKnown RBP23.88■■□□□ 1.41
VEGFA-217ENST00000518538 CHST7Q9NS84 486 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 RMND1Q9NWS8 449 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 RBAKQ9NYW8 714 aaPredicted RBP23.88■■□□□ 1.41
VEGFA-217ENST00000518538 HSPBP1Q9NZL4 362 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 SSX2IPQ9Y2D8 614 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 C2CD2Q9Y426 696 aa23.88■■□□□ 1.41
VEGFA-217ENST00000518538 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.87■■□□□ 1.41
VEGFA-217ENST00000518538 GOLGA8IPA6NC78 632 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 GOLGA8JA6NMD2 632 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 PER2O15055 1255 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 KIF20AO95235 890 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 SMC2O95347 1197 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 NFICP08651 508 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 LRPAP1P30533 357 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 GLUD2P49448 558 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms