RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 GPC3P51654 580 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 EPHB4P54760 987 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SLC12A3P55017 1021 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 AMPD3Q01432 767 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MGAT3Q09327 533 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 UBAP2LQ14157 1087 aaKnown RBP6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TFDP1Q14186 410 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MXD4Q14582 209 aaPredicted RBP6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 LPIN1Q14693 890 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MBTPS1Q14703 1052 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 GPNMBQ14956 572 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 FBXO47Q5MNV8 452 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RESP18Q5W5W9 173 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 C16orf59Q7L2K0 433 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 OTOP2Q7RTS6 562 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 DYMQ7RTS9 669 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 GPBP1Q86WP2 473 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CCNJLQ8IV13 435 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 LINC01465Q8N7H1 131 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RNF149Q8NC42 400 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 DBF4BQ8NFT6 615 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ASAP3Q8TDY4 903 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MRPS27Q92552 414 aaKnown RBP6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SEPT8Q92599 483 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 STAMQ92783 540 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SEC16BQ96JE7 1060 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 IFT74Q96LB3 600 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CNTNAP3BQ96NU0 1288 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PYM1Q9BRP8 204 aaKnown RBP6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RUSC1Q9BVN2 902 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CNTNAP3Q9BZ76 1288 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 INO80BQ9C086 356 aaPredicted RBP6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 NUCKS1Q9H1E3 243 aaKnown RBP6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ADAMTS10Q9H324 1103 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 AGO3Q9H9G7 860 aaKnown RBP6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ZFYVE1Q9HBF4 777 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MARK1Q9P0L2 795 aa6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 NOC2LQ9Y3T9 749 aaKnown RBP6.4□□□□□ -1.38
SCARNA6.1-201ENST00000516989 BRCA2P51587 3418 aa6.4□□□□□ -1.39
SCARNA6.1-201ENST00000516989 A0A087X0B3 334 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 A0A1W2PQ27 194 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 A0A1W2PQ64 194 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 A0A1W2PQD8 194 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 LRRIQ4A6NIV6 560 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 INO80B-WBP1J3KQ70 363 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 BNIP3LO60238 219 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CSDE1O75534 798 aaKnown RBP6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 KIF4AO95239 1232 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MAP3K6O95382 1288 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CXCL10P02778 98 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PFKMP08237 780 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 DARSP14868 501 aaKnown RBP6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PFKFB1P16118 471 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ZSCAN20P17040 1043 aaPredicted RBP6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 LIG1P18858 919 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FGFR4P22455 802 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GLRA2P23416 452 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SOX18P35713 384 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 AFMP43652 599 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NDUFA8P51970 172 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PEX3P56589 373 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PLAURQ03405 335 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NCBP1Q09161 790 aaKnown RBP6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SPEM2Q0P670 501 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GIT2Q14161 759 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 IKBKEQ14164 716 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PPP2R5AQ15172 486 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SHHQ15465 462 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 LONRF3Q496Y0 759 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ARSHQ5FYA8 562 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TMEM240Q5SV17 173 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ODR4Q5SWX8 454 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 C9orf50Q5SZB4 431 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CNKSR3Q6P9H4 555 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PSRC1Q6PGN9 363 aaPredicted RBP6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CATSPER4Q7RTX7 472 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ZNF410Q86VK4 478 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ZBTB8OSQ8IWT0 167 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CEP57L1Q8IYX8 460 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MYCT1Q8N699 235 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CEP120Q8N960 986 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 USP38Q8NB14 1042 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 DEPTORQ8TB45 409 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 LRRC15Q8TF66 581 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TMEM40Q8WWA1 233 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 KIFAP3Q92845 792 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 BHMTQ93088 406 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 EAF1Q96JC9 268 aaPredicted RBP6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SLC30A3Q99726 388 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GDF15Q99988 308 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TIPINQ9BVW5 301 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 IFIH1Q9BYX4 1025 aaKnown RBP6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 LRRC27Q9C0I9 530 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MTIF3Q9H2K0 278 aaKnown RBP6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PIF1Q9H611 641 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 STK17AQ9UEE5 414 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 KCNG1Q9UIX4 513 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PADI3Q9ULW8 664 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ST3GAL5Q9UNP4 418 aa6.39□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SQORQ9Y6N5 450 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms