RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 FAXDC2Q96IV6 333 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 TGS1Q96RS0 853 aaKnown RBP3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 FNBP1Q96RU3 617 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 PRMT1Q99873 361 aaKnown RBP3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 ELAC2Q9BQ52 826 aaKnown RBP3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 MXRA8Q9BRK3 442 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 SIKE1Q9BRV8 207 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 CCDC28BQ9BUN5 200 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 STRA6Q9BX79 667 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 PITPNM3Q9BZ71 974 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 CELF4Q9BZC1 486 aaKnown RBP3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 ZNF518BQ9C0D4 1074 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 GPR88Q9GZN0 384 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 DNAI2Q9GZS0 605 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 VPS33BQ9H267 617 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 NEUROG2Q9H2A3 272 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 LRMDAQ9H2I8 198 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 VCX3BQ9H321 246 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 MMADHCQ9H3L0 296 aaPredicted RBP3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 CDC42EP4Q9H3Q1 356 aaKnown RBP3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 ECT2Q9H8V3 914 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 KCNK9Q9NPC2 374 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 SAR1AQ9NR31 198 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 SPATS2LQ9NUQ6 558 aaKnown RBP3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 PARVAQ9NVD7 372 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 FGFR1OP2Q9NVK5 253 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 RAB20Q9NX57 234 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 HSPBP1Q9NZL4 362 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 STOML1Q9UBI4 398 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 CNOT8Q9UFF9 292 aaKnown RBP3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 POLLQ9UGP5 575 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 IP6K2Q9UHH9 426 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 ANAPC7Q9UJX3 599 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 ANAPC5Q9UJX4 755 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 NOCTQ9UK39 431 aaKnown RBP3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 PPP1R9AQ9ULJ8 1098 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 PRR12Q9ULL5 1215 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 C15orf41Q9Y2V0 281 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 SNX24Q9Y343 169 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 COQ4Q9Y3A0 265 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 CTDP1Q9Y5B0 961 aaPredicted RBP3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 IKBKGQ9Y6K9 419 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 CLUHO75153 1309 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 NFASCO94856 1347 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 LOC285556D6RIA3 1793 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 DOCK1Q14185 1865 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 KIAA1217Q5T5P2 1943 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 TMEM110-MUSTN1A8MSY1 372 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 A8MXQ7 604 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 RSPH10B2B2RC85 870 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 TCP11X1B4DZS4 312 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 RASA4BC9J798 803 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 ANKRD65E5RJM6 399 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 FOXN3O00409 490 aaPredicted RBP3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 POLRMTO00411 1230 aaKnown RBP3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 EML1O00423 815 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 DNM1LO00429 736 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 TRAFD1O14545 582 aaPredicted RBP3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 HNRNPDLO14979 420 aaKnown RBP3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 WDR46O15213 610 aaKnown RBP3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 MAGEB2O15479 319 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 RASA4O43374 803 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 MED7O43513 233 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 KCNQ2O43526 872 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 CHMP2AO43633 222 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 EDIL3O43854 480 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 GAS2O43903 313 aaKnown RBP3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 TBC1D12O60347 775 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 CCDC22O60826 627 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 ACSL3O95573 720 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 ICAM1P05362 532 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 KRT7P08729 469 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 GSTA2P09210 222 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 RSPH10BP0C881 870 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 DLATP10515 647 aaKnown RBP3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 SKIP12755 728 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 KRT5P13647 590 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 FGFR4P22455 802 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 KCNA4P22459 653 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 NMT1P30419 496 aaKnown RBP3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 YWHABP31946 246 aaKnown RBP3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 HOXD13P35453 343 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 MSH2P43246 934 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 CASP4P49662 377 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 RARRES1P49788 294 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 HSD17B4P51659 736 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 SNX16P57768 344 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 PSMC6P62333 389 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 IRX4P78413 519 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 EVX2Q03828 476 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 BNIP1Q12981 228 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 GRM1Q13255 1194 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 ZNF211Q13398 564 aaPredicted RBP3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 TNFAIP1Q13829 316 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 PIGHQ14442 188 aaPredicted RBP3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 NAA25Q14CX7 972 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 ACAP1Q15027 740 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 PDK4Q16654 411 aa3.58□□□□□ -1.84
RNU4ATAC3P-201ENST00000516699 HADHQ16836 314 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms