RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-213ENST00000515776 IKZF4Q9H2S9 585 aa4.35□□□□□ -1.71
HMGCR-213ENST00000515776 PLEKHA4Q9H4M7 779 aa4.35□□□□□ -1.71
HMGCR-213ENST00000515776 RPAP3Q9H6T3 665 aaPredicted RBP4.35□□□□□ -1.71
HMGCR-213ENST00000515776 KLC4Q9NSK0 619 aa4.35□□□□□ -1.71
HMGCR-213ENST00000515776 VPS18Q9P253 973 aa4.35□□□□□ -1.71
HMGCR-213ENST00000515776 CDC42EP3Q9UKI2 254 aa4.35□□□□□ -1.71
HMGCR-213ENST00000515776 SRPK3Q9UPE1 567 aa4.35□□□□□ -1.71
HMGCR-213ENST00000515776 ATP6V0A2Q9Y487 856 aa4.35□□□□□ -1.71
HMGCR-213ENST00000515776 TIMM22Q9Y584 194 aa4.35□□□□□ -1.71
HMGCR-213ENST00000515776 COMMD10Q9Y6G5 202 aa4.35□□□□□ -1.71
HMGCR-213ENST00000515776 WDR33Q9C0J8 1336 aaKnown RBP4.35□□□□□ -1.71
HMGCR-213ENST00000515776 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGCR-213ENST00000515776 BICDL2A1A5D9 508 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 LIN7AO14910 233 aaPredicted RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 ARHGAP6O43182 974 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 KLF4O43474 513 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 CEP104O60308 925 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 WDHD1O75717 1129 aaPredicted RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 RASSF9O75901 435 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 PENKP01210 267 aaPredicted RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 ZFXP17010 805 aaPredicted RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 DESP17661 470 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 TRIM21P19474 475 aaKnown RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 DNAJA1P31689 397 aaKnown RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 TCF7P36402 384 aaPredicted RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 ADCY8P40145 1251 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 CTAG1AP78358 180 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 IL13RA1P78552 427 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 PHEXP78562 749 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 DPTQ07507 201 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 FOXL1Q12952 345 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 PAK1Q13153 545 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 NFYCQ13952 458 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 RCN1Q15293 331 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 GPR19Q15760 415 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 SMN1Q16637 294 aaKnown RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 CCDC57Q2TAC2 916 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 PABPC1LQ4VXU2 614 aaKnown RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 BZW1Q7L1Q6 419 aaKnown RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 DPH6Q7L8W6 267 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 UBE2Q1Q7Z7E8 422 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 C11orf96Q7Z7L8 435 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 FAM228AQ86W67 206 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 OSTM1Q86WC4 334 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 PTRH1Q86Y79 214 aaKnown RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 CCDC50Q8IVM0 306 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 RNF168Q8IYW5 571 aaPredicted RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 TRMT2AQ8IZ69 625 aaKnown RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 CEP112Q8N8E3 955 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 C1orf131Q8NDD1 294 aaKnown RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 CNNM3Q8NE01 707 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 CTNNBL1Q8WYA6 563 aaPredicted RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 MPHOSPH6Q99547 160 aaKnown RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 TINF2Q9BSI4 451 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 FUCA2Q9BTY2 467 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 OSBPL10Q9BXB5 764 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 KIAA1683Q9H0B3 1180 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 RSPH9Q9H1X1 276 aaPredicted RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 CCDC68Q9H2F9 335 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 WDR26Q9H7D7 661 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 PAPOLBQ9NRJ5 636 aaKnown RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 HELLSQ9NRZ9 838 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 CATSPERZQ9NTU4 200 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 ZMAT5Q9UDW3 170 aaKnown RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 TMED5Q9Y3A6 229 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 TTLL3Q9Y4R7 772 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 GMEB1Q9Y692 573 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 BZW2Q9Y6E2 419 aaKnown RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 RPAP1Q9BWH6 1393 aaPredicted RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 SPATA31E1Q6ZUB1 1445 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 POLA1P09884 1462 aaPredicted RBP4.34□□□□□ -1.71
HMGCR-213ENST00000515776 RUSC2Q8N2Y8 1516 aa4.34□□□□□ -1.71
HMGCR-213ENST00000515776 ATP10AO60312 1499 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 ANKRD30BQ9BXX2 1392 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 KIF15Q9NS87 1388 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 MYBBP1AQ9BQG0 1328 aaKnown RBP4.33□□□□□ -1.72
HMGCR-213ENST00000515776 USP27XA6NNY8 438 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 GOLGA8AA7E2F4 631 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 TMEM110-MUSTN1A8MSY1 372 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 MAN2B1O00754 1011 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 LSM1O15116 133 aaKnown RBP4.33□□□□□ -1.72
HMGCR-213ENST00000515776 GFPT2O94808 682 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 FGFR1OPO95684 399 aaKnown RBP4.33□□□□□ -1.72
HMGCR-213ENST00000515776 HMGCRP04035 888 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 AMY2AP04746 511 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 PARP1P09874 1014 aaKnown RBP4.33□□□□□ -1.72
HMGCR-213ENST00000515776 CCDC159P0C7I6 412 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 PDE6AP16499 860 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 AMY2BP19961 511 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 IBSPP21815 317 aaPredicted RBP4.33□□□□□ -1.72
HMGCR-213ENST00000515776 ACRV1P26436 265 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 HIBADHP31937 336 aaKnown RBP4.33□□□□□ -1.72
HMGCR-213ENST00000515776 ATICP31939 592 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 RPS19P39019 145 aaKnown RBP4.33□□□□□ -1.72
HMGCR-213ENST00000515776 AMPHP49418 695 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 GNAQP50148 359 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 CCT8P50990 548 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 NEK2P51955 445 aa4.33□□□□□ -1.72
HMGCR-213ENST00000515776 POU5F1Q01860 360 aaKnown RBP4.33□□□□□ -1.72
HMGCR-213ENST00000515776 EIF2B5Q13144 721 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms