RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 CITO14578 2027 aa28.24■■■□□ 2.11
DDR1-279ENST00000515529 HOXD13P35453 343 aa28.23■■■□□ 2.11
DDR1-279ENST00000515529 POU5F1Q01860 360 aaKnown RBP28.23■■■□□ 2.11
DDR1-279ENST00000515529 KIAA0895Q8NCT3 520 aa28.23■■■□□ 2.11
DDR1-279ENST00000515529 SMARCE1Q969G3 411 aa28.23■■■□□ 2.11
DDR1-279ENST00000515529 DDX27Q96GQ7 796 aaKnown RBP28.23■■■□□ 2.11
DDR1-279ENST00000515529 CACNG4Q9UBN1 327 aa28.23■■■□□ 2.11
DDR1-279ENST00000515529 TRANK1O15050 2925 aa28.23■■■□□ 2.11
DDR1-279ENST00000515529 FSCN2O14926 492 aa28.22■■■□□ 2.11
DDR1-279ENST00000515529 EXTL3O43909 919 aa28.22■■■□□ 2.11
DDR1-279ENST00000515529 CLEC17AQ6ZS10 378 aa28.22■■■□□ 2.11
DDR1-279ENST00000515529 GPD1LQ8N335 351 aa28.22■■■□□ 2.11
DDR1-279ENST00000515529 GOLGA5Q8TBA6 731 aa28.22■■■□□ 2.11
DDR1-279ENST00000515529 PAAF1Q9BRP4 392 aa28.22■■■□□ 2.11
DDR1-279ENST00000515529 GOLGA2P5Q9HBQ8 144 aa28.22■■■□□ 2.11
DDR1-279ENST00000515529 AGPAT3Q9NRZ7 376 aa28.22■■■□□ 2.11
DDR1-279ENST00000515529 UBQLN1Q9UMX0 589 aaKnown RBP28.22■■■□□ 2.11
DDR1-279ENST00000515529 GOLGA8IPA6NC78 632 aa28.21■■■□□ 2.11
DDR1-279ENST00000515529 GOLGA8JA6NMD2 632 aa28.21■■■□□ 2.11
DDR1-279ENST00000515529 MEFVO15553 781 aaPredicted RBP28.21■■■□□ 2.11
DDR1-279ENST00000515529 IL18RAPO95256 599 aa28.21■■■□□ 2.11
DDR1-279ENST00000515529 SPAG1Q07617 926 aa28.21■■■□□ 2.11
DDR1-279ENST00000515529 ELOA2Q8IYF1 753 aaPredicted RBP28.21■■■□□ 2.11
DDR1-279ENST00000515529 HASPINQ8TF76 798 aa28.21■■■□□ 2.11
DDR1-279ENST00000515529 C18orf25Q96B23 403 aaPredicted RBP28.21■■■□□ 2.11
DDR1-279ENST00000515529 GSDMAQ96QA5 445 aa28.21■■■□□ 2.11
DDR1-279ENST00000515529 ZBP1Q9H171 429 aa28.21■■■□□ 2.11
DDR1-279ENST00000515529 ASB7Q9H672 318 aa28.21■■■□□ 2.11
DDR1-279ENST00000515529 TLE6Q9H808 572 aa28.21■■■□□ 2.11
DDR1-279ENST00000515529 HSPBP1Q9NZL4 362 aa28.21■■■□□ 2.11
DDR1-279ENST00000515529 PCDHGC5Q9Y5F6 944 aa28.21■■■□□ 2.11
DDR1-279ENST00000515529 SF3B1O75533 1304 aaKnown RBP eCLIP28.2■■■□□ 2.11
DDR1-279ENST00000515529 F8W810 466 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 GOLGA6L22H0YM25 854 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 NCK2O43639 380 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 B3GAT3O94766 335 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 KIF4AO95239 1232 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 CXCL14O95715 111 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 SOD2P04179 222 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 URODP06132 367 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 CLCNKBP51801 687 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 KIAA1841Q6NSI8 718 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 FUT10Q6P4F1 479 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 DCLRE1AQ6PJP8 1040 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 BEST2Q8NFU1 509 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 HERC2P3Q9BVR0 1158 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 IGFLR1Q9H665 355 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 KIAA1586Q9HCI6 787 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 RBAKQ9NYW8 714 aaPredicted RBP28.2■■■□□ 2.1
DDR1-279ENST00000515529 SSX2IPQ9Y2D8 614 aa28.2■■■□□ 2.1
DDR1-279ENST00000515529 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.19■■■□□ 2.1
DDR1-279ENST00000515529 PODXLO00592 558 aa28.19■■■□□ 2.1
DDR1-279ENST00000515529 CLIC2O15247 247 aa28.19■■■□□ 2.1
DDR1-279ENST00000515529 TGFB1I1O43294 461 aa28.19■■■□□ 2.1
DDR1-279ENST00000515529 CTSAP10619 480 aa28.19■■■□□ 2.1
DDR1-279ENST00000515529 RPL9P32969 192 aaKnown RBP28.19■■■□□ 2.1
DDR1-279ENST00000515529 CYP2J2P51589 502 aa28.19■■■□□ 2.1
DDR1-279ENST00000515529 SOX4Q06945 474 aaPredicted RBP28.19■■■□□ 2.1
DDR1-279ENST00000515529 ELAVL2Q12926 359 aaKnown RBP28.19■■■□□ 2.1
DDR1-279ENST00000515529 TMEM132DQ14C87 1099 aa28.19■■■□□ 2.1
DDR1-279ENST00000515529 JADE1Q6IE81 842 aa28.19■■■□□ 2.1
DDR1-279ENST00000515529 EP400NLQ6ZTU2 488 aa28.19■■■□□ 2.1
DDR1-279ENST00000515529 RBM23Q86U06 439 aaKnown RBP28.19■■■□□ 2.1
DDR1-279ENST00000515529 GTPBP4Q9BZE4 634 aaKnown RBP28.19■■■□□ 2.1
DDR1-279ENST00000515529 DERAQ9Y315 318 aa28.19■■■□□ 2.1
DDR1-279ENST00000515529 TRIP11Q15643 1979 aa28.19■■■□□ 2.1
DDR1-279ENST00000515529 FSD2A1L4K1 749 aa28.18■■■□□ 2.1
DDR1-279ENST00000515529 ADRB2P07550 413 aa28.18■■■□□ 2.1
DDR1-279ENST00000515529 NRIP1P48552 1158 aa28.18■■■□□ 2.1
DDR1-279ENST00000515529 UPP1Q16831 310 aa28.18■■■□□ 2.1
DDR1-279ENST00000515529 CRELD2Q6UXH1 353 aaPredicted RBP28.18■■■□□ 2.1
DDR1-279ENST00000515529 BRSK2Q8IWQ3 736 aa28.18■■■□□ 2.1
DDR1-279ENST00000515529 VN1R3Q9BXE9 311 aa28.18■■■□□ 2.1
DDR1-279ENST00000515529 MRPL17Q9NRX2 175 aaKnown RBP28.18■■■□□ 2.1
DDR1-279ENST00000515529 TUBGCP4Q9UGJ1 667 aa28.18■■■□□ 2.1
DDR1-279ENST00000515529 PCDHA5Q9Y5H7 936 aa28.18■■■□□ 2.1
DDR1-279ENST00000515529 ZNF233A6NK53 670 aa28.17■■■□□ 2.1
DDR1-279ENST00000515529 TMEM189-UBE2V1I3L0A0 370 aa28.17■■■□□ 2.1
DDR1-279ENST00000515529 TRAPPC3O43617 180 aa28.17■■■□□ 2.1
DDR1-279ENST00000515529 CYP3A5P20815 502 aa28.17■■■□□ 2.1
DDR1-279ENST00000515529 GLUD2P49448 558 aa28.17■■■□□ 2.1
DDR1-279ENST00000515529 USP41Q3LFD5 358 aa28.17■■■□□ 2.1
DDR1-279ENST00000515529 ADGRD2Q7Z7M1 963 aa28.17■■■□□ 2.1
DDR1-279ENST00000515529 MRPL43Q8N983 215 aaKnown RBP28.17■■■□□ 2.1
DDR1-279ENST00000515529 XXYLT1Q8NBI6 393 aa28.17■■■□□ 2.1
DDR1-279ENST00000515529 ZSWIM2Q8NEG5 633 aa28.17■■■□□ 2.1
DDR1-279ENST00000515529 ERCC4Q92889 916 aaPredicted RBP28.17■■■□□ 2.1
DDR1-279ENST00000515529 CDCA3Q99618 268 aaPredicted RBP28.17■■■□□ 2.1
DDR1-279ENST00000515529 COG5Q9UP83 839 aa28.17■■■□□ 2.1
DDR1-279ENST00000515529 MAPK8IP1Q9UQF2 711 aa28.17■■■□□ 2.1
DDR1-279ENST00000515529 C2CD2Q9Y426 696 aa28.17■■■□□ 2.1
DDR1-279ENST00000515529 NUB1Q9Y5A7 615 aa28.17■■■□□ 2.1
DDR1-279ENST00000515529 MYO7AQ13402 2215 aa28.16■■■□□ 2.1
DDR1-279ENST00000515529 C2orf71A6NGG8 1288 aa28.16■■■□□ 2.1
DDR1-279ENST00000515529 HIDE1A8MVS5 230 aa28.16■■■□□ 2.1
DDR1-279ENST00000515529 CALUO43852 315 aaPredicted RBP28.16■■■□□ 2.1
DDR1-279ENST00000515529 NFICP08651 508 aa28.16■■■□□ 2.1
DDR1-279ENST00000515529 HYAL1Q12794 435 aa28.16■■■□□ 2.1
DDR1-279ENST00000515529 AUTS2Q8WXX7 1259 aa28.16■■■□□ 2.1
DDR1-279ENST00000515529 HLA-CQ95604 372 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms