RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 MORC4Q8TE76 937 aa8.79□□□□□ -1
CPNE4-211ENST00000514439 PRPF31Q8WWY3 499 aaKnown RBP8.79□□□□□ -1
CPNE4-211ENST00000514439 FAM167AQ96KS9 214 aa8.79□□□□□ -1
CPNE4-211ENST00000514439 WNT8AQ9H1J5 351 aa8.79□□□□□ -1
CPNE4-211ENST00000514439 DPH5Q9H2P9 285 aa8.79□□□□□ -1
CPNE4-211ENST00000514439 AZI2Q9H6S1 392 aa8.79□□□□□ -1
CPNE4-211ENST00000514439 APOBEC3GQ9HC16 384 aaKnown RBP8.79□□□□□ -1
CPNE4-211ENST00000514439 CNOT8Q9UFF9 292 aaKnown RBP8.79□□□□□ -1
CPNE4-211ENST00000514439 KCNH4Q9UQ05 1017 aa8.79□□□□□ -1
CPNE4-211ENST00000514439 UTP11Q9Y3A2 253 aaKnown RBP8.79□□□□□ -1
CPNE4-211ENST00000514439 PCDHB2Q9Y5E7 798 aa8.79□□□□□ -1
CPNE4-211ENST00000514439 CNTNAP2Q9UHC6 1331 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 TTLL13PA6NNM8 815 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 UNGP13051 313 aaPredicted RBP8.78□□□□□ -1
CPNE4-211ENST00000514439 CTNNA1P35221 906 aaKnown RBP8.78□□□□□ -1
CPNE4-211ENST00000514439 HNRNPH2P55795 449 aaKnown RBP8.78□□□□□ -1
CPNE4-211ENST00000514439 CUL2Q13617 745 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 TTLL12Q14166 644 aaPredicted RBP8.78□□□□□ -1
CPNE4-211ENST00000514439 PPP2R5EQ16537 467 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 ZSCAN26Q16670 478 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 Q3C1V9 767 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 HSDL1Q3SXM5 330 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 SEL1L2Q5TEA6 688 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 ZNF677Q86XU0 584 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 OR5B17Q8NGF7 314 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 GLG1Q92896 1179 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 CDCA5Q96FF9 252 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 GPR20Q99678 358 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 FHDC1Q9C0D6 1143 aaPredicted RBP8.78□□□□□ -1
CPNE4-211ENST00000514439 RBPJLQ9UBG7 517 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 UMODL1Q5DID0 1318 aa8.78□□□□□ -1
CPNE4-211ENST00000514439 PHF2O75151 1096 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 PYGMP11217 842 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 ACO1P21399 889 aaKnown RBP8.77□□□□□ -1
CPNE4-211ENST00000514439 CTNNA2P26232 953 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 NF2P35240 595 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 FLT3P36888 993 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 HSD17B3P37058 310 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 NOP14P78316 857 aaKnown RBP8.77□□□□□ -1
CPNE4-211ENST00000514439 DR1Q01658 176 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 PPIL2Q13356 520 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 MOGSQ13724 837 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 UAP1Q16222 522 aaPredicted RBP8.77□□□□□ -1
CPNE4-211ENST00000514439 CELF3Q5SZQ8 465 aaKnown RBP8.77□□□□□ -1
CPNE4-211ENST00000514439 ZPBP2Q6X784 338 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 LEKR1Q6ZMV7 388 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.77□□□□□ -1
CPNE4-211ENST00000514439 CD302Q8IX05 232 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 MCOLN2Q8IZK6 566 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 ATP8B4Q8TF62 1192 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 CPA5Q8WXQ8 436 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 BBXQ8WY36 941 aaPredicted RBP8.77□□□□□ -1
CPNE4-211ENST00000514439 LRRC45Q96CN5 670 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 MPHOSPH6Q99547 160 aaKnown RBP8.77□□□□□ -1
CPNE4-211ENST00000514439 TRIM31Q9BZY9 425 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 CCDC113Q9H0I3 377 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 RAB17Q9H0T7 212 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 FAM114A2Q9NRY5 505 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 ANAPC7Q9UJX3 599 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 PLAAQ9Y263 795 aa8.77□□□□□ -1
CPNE4-211ENST00000514439 ZNFX1Q9P2E3 1918 aaKnown RBP8.77□□□□□ -1.01
CPNE4-211ENST00000514439 DNAJC25-GNG10A0A024R161 153 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 ZBTB42B2RXF5 422 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 NOP56O00567 594 aaKnown RBP8.77□□□□□ -1.01
CPNE4-211ENST00000514439 CLDN3O15551 220 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 MSCO60682 206 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 LGR5O75473 907 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 CYP1A1P04798 512 aaPredicted RBP8.77□□□□□ -1.01
CPNE4-211ENST00000514439 CLTAP09496 248 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 HSPA6P17066 643 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 TNFSF9P41273 254 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 EFNA5P52803 228 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 BPIFB4P59827 614 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 MKRN4PQ13434 485 aaPredicted RBP8.77□□□□□ -1.01
CPNE4-211ENST00000514439 DHX34Q14147 1143 aaKnown RBP8.77□□□□□ -1.01
CPNE4-211ENST00000514439 KCTD2Q14681 263 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 IER5Q5VY09 327 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 CDCA2Q69YH5 1023 aaPredicted RBP8.77□□□□□ -1.01
CPNE4-211ENST00000514439 JAMLQ86YT9 394 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 BRSK2Q8IWQ3 736 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 FBXO16Q8IX29 292 aaPredicted RBP8.77□□□□□ -1.01
CPNE4-211ENST00000514439 ZDHHC14Q8IZN3 488 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 LRRC71Q8N4P6 559 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 SH2D3CQ8N5H7 860 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 PRELID2Q8N945 189 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 OPTNQ96CV9 577 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 C18orf8Q96DM3 657 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 MMP19Q99542 508 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 TRIM7Q9C029 511 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 AVENQ9NQS1 362 aaPredicted RBP8.77□□□□□ -1.01
CPNE4-211ENST00000514439 PPME1Q9Y570 386 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 NUB1Q9Y5A7 615 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 PCDHA3Q9Y5H8 950 aa8.77□□□□□ -1.01
CPNE4-211ENST00000514439 TCRBV7S2A1N4TA0A589 114 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 FAM187AA6NFU0 413 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 FAM189A1O60320 539 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 SHOX2O60902 331 aaPredicted RBP8.76□□□□□ -1.01
CPNE4-211ENST00000514439 RPS6KA5O75582 802 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 TOM1L1O75674 476 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 SRGAP2CP0DJJ0 459 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms