RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 WDR66Q8TBY9 1149 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 GCDHQ92947 438 aaPredicted RBP5.45□□□□□ -1.54
CLDND1-228ENST00000513873 DYDC2Q96IM9 177 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 HIST1H2AHQ96KK5 128 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 SORCS2Q96PQ0 1159 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 LMF1Q96S06 567 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 HIST1H2AJQ99878 128 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 NOL10Q9BSC4 688 aaKnown RBP5.45□□□□□ -1.54
CLDND1-228ENST00000513873 THUMPD2Q9BTF0 503 aaKnown RBP5.45□□□□□ -1.54
CLDND1-228ENST00000513873 OR10A2Q9H208 303 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 SEC61A2Q9H9S3 476 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 DENND2AQ9ULE3 1009 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 SLC4A7Q9Y6M7 1214 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 PCDH11XQ9BZA7 1347 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 PCDH11YQ9BZA8 1340 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 PXDNLA1KZ92 1463 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 NFAT5O94916 1531 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 GOLGA8BA8MQT2 603 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 K7ESM1 405 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 RNMTO43148 476 aaKnown RBP5.44□□□□□ -1.54
CLDND1-228ENST00000513873 PRICKLE3O43900 615 aaPredicted RBP5.44□□□□□ -1.54
CLDND1-228ENST00000513873 HMMRO75330 724 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 HMGB2P26583 209 aaKnown RBP5.44□□□□□ -1.54
CLDND1-228ENST00000513873 STAT5BP51692 787 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 TMPRSS15P98073 1019 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 DCTN1Q14203 1278 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 MYBPC3Q14896 1274 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 SLFN13Q68D06 897 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 STRA8Q7Z7C7 330 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 CIR1Q86X95 450 aaPredicted RBP5.44□□□□□ -1.54
CLDND1-228ENST00000513873 GIMAP8Q8ND71 665 aaPredicted RBP5.44□□□□□ -1.54
CLDND1-228ENST00000513873 OR5AN1Q8NGI8 311 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 ZCRB1Q8TBF4 217 aaKnown RBP5.44□□□□□ -1.54
CLDND1-228ENST00000513873 LPPQ93052 612 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 WDR92Q96MX6 357 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 WNT8AQ9H1J5 351 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 MTG2Q9H4K7 406 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 WDR26Q9H7D7 661 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 POLR3BQ9NW08 1133 aaPredicted RBP5.44□□□□□ -1.54
CLDND1-228ENST00000513873 PUF60Q9UHX1 559 aaKnown RBP5.44□□□□□ -1.54
CLDND1-228ENST00000513873 MAGEL2Q9UJ55 1249 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 COL18A1P39060 1754 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 RGPD5Q99666 1765 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 MYPNQ86TC9 1320 aa5.44□□□□□ -1.54
CLDND1-228ENST00000513873 USP54Q70EL1 1684 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 SBF1O95248 1867 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 LY75O60449 1722 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 PKD1L3Q7Z443 1732 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 ERVV-2B6SEH9 535 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 ELL2O00472 640 aaPredicted RBP5.43□□□□□ -1.54
CLDND1-228ENST00000513873 ARHGAP6O43182 974 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 NRP2O60462 931 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 PCDH8O95206 1070 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 GNAI3P08754 354 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 TRIM27P14373 513 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 IBSPP21815 317 aaPredicted RBP5.43□□□□□ -1.54
CLDND1-228ENST00000513873 ID4P47928 161 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 EPHB4P54760 987 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 STAT4Q14765 748 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 TBC1D10BQ4KMP7 808 aaPredicted RBP5.43□□□□□ -1.54
CLDND1-228ENST00000513873 AGBL4Q5VU57 503 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 RNF219Q5W0B1 726 aaPredicted RBP5.43□□□□□ -1.54
CLDND1-228ENST00000513873 TRIM68Q6AZZ1 485 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 KANSL1Q7Z3B3 1105 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 COL23A1Q86Y22 540 aaPredicted RBP5.43□□□□□ -1.54
CLDND1-228ENST00000513873 AFAP1L2Q8N4X5 818 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 C8orf58Q8NAV2 365 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 CHST13Q8NET6 341 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 IL17REQ8NFR9 667 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 RSAD2Q8WXG1 361 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 ZNF496Q96IT1 587 aaPredicted RBP5.43□□□□□ -1.54
CLDND1-228ENST00000513873 LRRC37BQ96QE4 947 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 MENTQ9BUN1 341 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 TEX13AQ9BXU3 409 aaPredicted RBP5.43□□□□□ -1.54
CLDND1-228ENST00000513873 ANO3Q9BYT9 981 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 KIAA1683Q9H0B3 1180 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 HYPKQ9NX55 129 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 DBF4Q9UBU7 674 aaPredicted RBP5.43□□□□□ -1.54
CLDND1-228ENST00000513873 USP18Q9UMW8 372 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 PTPN22Q9Y2R2 807 aa5.43□□□□□ -1.54
CLDND1-228ENST00000513873 VIRMAQ69YN4 1812 aaKnown RBP5.43□□□□□ -1.54
CLDND1-228ENST00000513873 CEMIPQ8WUJ3 1361 aa5.42□□□□□ -1.54
CLDND1-228ENST00000513873 KIF13BQ9NQT8 1826 aa5.42□□□□□ -1.54
CLDND1-228ENST00000513873 ARFGEF1Q9Y6D6 1849 aa5.42□□□□□ -1.54
CLDND1-228ENST00000513873 FSBPO95073 299 aa5.42□□□□□ -1.54
CLDND1-228ENST00000513873 PHKG2P15735 406 aa5.42□□□□□ -1.54
CLDND1-228ENST00000513873 TNFRSF1AP19438 455 aa5.42□□□□□ -1.54
CLDND1-228ENST00000513873 NRG3P56975 720 aa5.42□□□□□ -1.54
CLDND1-228ENST00000513873 HDAC1Q13547 482 aaPredicted RBP5.42□□□□□ -1.54
CLDND1-228ENST00000513873 C20orf194Q5TEA3 1177 aa5.42□□□□□ -1.54
CLDND1-228ENST00000513873 LARP4Q71RC2 724 aaKnown RBP eCLIP5.42□□□□□ -1.54
CLDND1-228ENST00000513873 CXorf67Q86X51 503 aaPredicted RBP5.42□□□□□ -1.54
CLDND1-228ENST00000513873 CDYL2Q8N8U2 506 aa5.42□□□□□ -1.54
CLDND1-228ENST00000513873 GCC1Q96CN9 775 aa5.42□□□□□ -1.54
CLDND1-228ENST00000513873 NEIL1Q96FI4 390 aaPredicted RBP5.42□□□□□ -1.54
CLDND1-228ENST00000513873 A0A0A6YYJ9 748 aa5.41□□□□□ -1.54
CLDND1-228ENST00000513873 GOLGA8AA7E2F4 631 aa5.41□□□□□ -1.54
CLDND1-228ENST00000513873 OPHN1O60890 802 aa5.41□□□□□ -1.54
CLDND1-228ENST00000513873 CNOT4O95628 575 aaKnown RBP5.41□□□□□ -1.54
CLDND1-228ENST00000513873 SNRPA1P09661 255 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms