RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 SPAG1Q07617 926 aa17.9■□□□□ 0.46
HMGCL-209ENST00000513148 MORC3Q14149 939 aa17.9■□□□□ 0.46
HMGCL-209ENST00000513148 ENOX2Q16206 610 aaKnown RBP17.9■□□□□ 0.46
HMGCL-209ENST00000513148 SLC10A6Q3KNW5 377 aa17.9■□□□□ 0.46
HMGCL-209ENST00000513148 FAM193BQ96PV7 902 aaPredicted RBP17.9■□□□□ 0.46
HMGCL-209ENST00000513148 TGS1Q96RS0 853 aaKnown RBP17.9■□□□□ 0.46
HMGCL-209ENST00000513148 TTYH1Q9H313 450 aaPredicted RBP17.9■□□□□ 0.46
HMGCL-209ENST00000513148 RPF1Q9H9Y2 349 aaKnown RBP17.9■□□□□ 0.46
HMGCL-209ENST00000513148 DNAJB4Q9UDY4 337 aa17.9■□□□□ 0.46
HMGCL-209ENST00000513148 CPSF3Q9UKF6 684 aaKnown RBP17.9■□□□□ 0.46
HMGCL-209ENST00000513148 DDHD2O94830 711 aa17.89■□□□□ 0.46
HMGCL-209ENST00000513148 KLHL10Q6JEL2 608 aa17.89■□□□□ 0.46
HMGCL-209ENST00000513148 Q7L0L9 218 aa17.89■□□□□ 0.46
HMGCL-209ENST00000513148 KANSL3Q9P2N6 904 aa17.89■□□□□ 0.46
HMGCL-209ENST00000513148 CACNG4Q9UBN1 327 aa17.89■□□□□ 0.46
HMGCL-209ENST00000513148 ANK1P16157 1881 aa17.89■□□□□ 0.45
HMGCL-209ENST00000513148 PDCD11Q14690 1871 aaKnown RBP17.89■□□□□ 0.45
HMGCL-209ENST00000513148 PPP2R3AQ06190 1150 aa17.89■□□□□ 0.45
HMGCL-209ENST00000513148 GRIK3Q13003 919 aa17.89■□□□□ 0.45
HMGCL-209ENST00000513148 BMS1Q14692 1282 aaKnown RBP17.89■□□□□ 0.45
HMGCL-209ENST00000513148 KYAT1Q16773 422 aa17.89■□□□□ 0.45
HMGCL-209ENST00000513148 CRELD2Q6UXH1 353 aaPredicted RBP17.89■□□□□ 0.45
HMGCL-209ENST00000513148 GPD1LQ8N335 351 aa17.89■□□□□ 0.45
HMGCL-209ENST00000513148 RDH13Q8NBN7 331 aa17.89■□□□□ 0.45
HMGCL-209ENST00000513148 CLP1Q92989 425 aaKnown RBP17.89■□□□□ 0.45
HMGCL-209ENST00000513148 NRDE2Q9H7Z3 1164 aa17.89■□□□□ 0.45
HMGCL-209ENST00000513148 COL4A4P53420 1690 aaPredicted RBP17.88■□□□□ 0.45
HMGCL-209ENST00000513148 NT5C1B-RDH14C9J2C7 533 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 INPPL1O15357 1258 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 EXTL3O43909 919 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 THP07101 528 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 CD44P16070 742 aaKnown RBP17.88■□□□□ 0.45
HMGCL-209ENST00000513148 EPC2Q52LR7 807 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 GOLGA5Q8TBA6 731 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 ZMAT2Q96NC0 199 aaKnown RBP17.88■□□□□ 0.45
HMGCL-209ENST00000513148 SEMA6BQ9H3T3 888 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 SMIM28A0A1B0GU29 152 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 LACTBL1A8MY62 500 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 PDXKO00764 312 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 CALUO43852 315 aaPredicted RBP17.88■□□□□ 0.45
HMGCL-209ENST00000513148 LDHAP00338 332 aaKnown RBP17.88■□□□□ 0.45
HMGCL-209ENST00000513148 LAG3P18627 525 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 ERVK-21P61565 698 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 STIM1Q13586 685 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 ALKAL1Q6UXT8 129 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 CBWD2Q8IUF1 395 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 ADSSL1Q8N142 457 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 COLGALT1Q8NBJ5 622 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 RSPH1Q8WYR4 309 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 RABGGTAQ92696 567 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 RBAKQ9NYW8 714 aaPredicted RBP17.88■□□□□ 0.45
HMGCL-209ENST00000513148 CNTN3Q9P232 1028 aa17.88■□□□□ 0.45
HMGCL-209ENST00000513148 TTC26A0AVF1 554 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 EPOPA6NHQ4 379 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 CASTOR2A6NHX0 329 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 EXOC3O60645 756 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 CSPG5O95196 566 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 NR3C1P04150 777 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 TUBB4AP04350 444 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 BMPR1AP36894 532 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 BCAR1P56945 870 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 SNRPFP62306 86 aaKnown RBP17.87■□□□□ 0.45
HMGCL-209ENST00000513148 CEP135Q66GS9 1140 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 KCNT2Q6UVM3 1135 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 TRIML1Q8N9V2 468 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 XXYLT1Q8NBI6 393 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 FBXO22Q8NEZ5 403 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 EEF2KMTQ96G04 330 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 ZNF558Q96NG5 402 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 GOLGA2P5Q9HBQ8 144 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 AAASQ9NRG9 546 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 PCDHB12Q9Y5F1 795 aa17.87■□□□□ 0.45
HMGCL-209ENST00000513148 TRIM49BA6NDI0 452 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 RFXAPO00287 272 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 PSMA7O14818 248 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 OR1G1P47890 313 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 ALDH7A1P49419 539 aaKnown RBP17.86■□□□□ 0.45
HMGCL-209ENST00000513148 WNT7BP56706 349 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 COBLL1Q53SF7 1204 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 CCDC186Q7Z3E2 898 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 GDPD5Q8WTR4 605 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 C18orf25Q96B23 403 aaPredicted RBP17.86■□□□□ 0.45
HMGCL-209ENST00000513148 KIF12Q96FN5 646 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 PPP1R10Q96QC0 940 aaKnown RBP17.86■□□□□ 0.45
HMGCL-209ENST00000513148 PRDM12Q9H4Q4 367 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 CTNND2Q9UQB3 1225 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 TRAF3IP3Q9Y228 551 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 PRG3Q9Y2Y8 225 aaPredicted RBP17.86■□□□□ 0.45
HMGCL-209ENST00000513148 RWDD3Q9Y3V2 267 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 PLXNA4Q9HCM2 1894 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 TMEM265A0A087WTH1 108 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 VGLL3A8MV65 326 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 KIAA0391O15091 583 aaKnown RBP17.86■□□□□ 0.45
HMGCL-209ENST00000513148 NR2F2P24468 414 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 SLC11A1P49279 550 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 PMS1P54277 932 aaKnown RBP17.86■□□□□ 0.45
HMGCL-209ENST00000513148 GRIN2CQ14957 1233 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 SNRNP35Q16560 246 aaKnown RBP17.86■□□□□ 0.45
HMGCL-209ENST00000513148 XKR4Q5GH76 650 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 C12orf56Q8IXR9 622 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms