RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 ZXDAP98168 799 aa5.95□□□□□ -1.46
CHD1-210ENST00000513064 PIN1Q13526 163 aaPredicted RBP5.95□□□□□ -1.46
CHD1-210ENST00000513064 ZNF529Q6P280 563 aa5.95□□□□□ -1.46
CHD1-210ENST00000513064 GDF7Q7Z4P5 450 aa5.95□□□□□ -1.46
CHD1-210ENST00000513064 TTC7BQ86TV6 843 aa5.95□□□□□ -1.46
CHD1-210ENST00000513064 ZNF276Q8N554 614 aa5.95□□□□□ -1.46
CHD1-210ENST00000513064 SLC25A43Q8WUT9 341 aaPredicted RBP5.95□□□□□ -1.46
CHD1-210ENST00000513064 KAT5Q92993 513 aa5.95□□□□□ -1.46
CHD1-210ENST00000513064 RAB24Q969Q5 203 aa5.95□□□□□ -1.46
CHD1-210ENST00000513064 TMX3Q96JJ7 454 aa5.95□□□□□ -1.46
CHD1-210ENST00000513064 CLPTM1LQ96KA5 538 aa5.95□□□□□ -1.46
CHD1-210ENST00000513064 NEU1Q99519 415 aa5.95□□□□□ -1.46
CHD1-210ENST00000513064 ZNF341Q9BYN7 854 aa5.95□□□□□ -1.46
CHD1-210ENST00000513064 RHOBTB2Q9BYZ6 727 aa5.95□□□□□ -1.46
CHD1-210ENST00000513064 RUVBL1Q9Y265 456 aaKnown RBP5.95□□□□□ -1.46
CHD1-210ENST00000513064 THRAP3Q9Y2W1 955 aaKnown RBP5.95□□□□□ -1.46
CHD1-210ENST00000513064 NPIPB8E9PQR5 432 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 C6P13671 934 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 NR4A1P22736 598 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 TLE1Q04724 770 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 ATP2B3Q16720 1220 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 ODR4Q5SWX8 454 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 AGAP9Q5VTM2 703 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 IGFL4Q6B9Z1 124 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 USP45Q70EL2 814 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 MED25Q71SY5 747 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 DCBLD1Q8N8Z6 715 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 FAM193BQ96PV7 902 aaPredicted RBP5.94□□□□□ -1.46
CHD1-210ENST00000513064 SLC46A2Q9BY10 475 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 C11orf54Q9H0W9 315 aaPredicted RBP5.94□□□□□ -1.46
CHD1-210ENST00000513064 FBXO34Q9NWN3 711 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 GPRC5BQ9NZH0 403 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 TRPM5Q9NZQ8 1165 aa5.94□□□□□ -1.46
CHD1-210ENST00000513064 GAGE12BA1L429 117 aa5.93□□□□□ -1.46
CHD1-210ENST00000513064 GAGE12HA6NDE8 117 aa5.93□□□□□ -1.46
CHD1-210ENST00000513064 ZNF185O15231 689 aa5.93□□□□□ -1.46
CHD1-210ENST00000513064 PF4V1P10720 104 aa5.93□□□□□ -1.46
CHD1-210ENST00000513064 ALAS1P13196 640 aa5.93□□□□□ -1.46
CHD1-210ENST00000513064 ZNF280AP59817 542 aaPredicted RBP5.93□□□□□ -1.46
CHD1-210ENST00000513064 RNASE9P60153 205 aaKnown RBP5.93□□□□□ -1.46
CHD1-210ENST00000513064 FAM189BP81408 668 aa5.93□□□□□ -1.46
CHD1-210ENST00000513064 CREMQ03060 361 aa5.93□□□□□ -1.46
CHD1-210ENST00000513064 RHOUQ7L0Q8 258 aa5.93□□□□□ -1.46
CHD1-210ENST00000513064 UBE3BQ7Z3V4 1068 aa5.93□□□□□ -1.46
CHD1-210ENST00000513064 ZFPM1Q8IX07 1006 aa5.93□□□□□ -1.46
CHD1-210ENST00000513064 RHOT2Q8IXI1 618 aa5.93□□□□□ -1.46
CHD1-210ENST00000513064 LENG9Q96B70 501 aa5.93□□□□□ -1.46
CHD1-210ENST00000513064 RTFDC1Q9BY42 306 aaPredicted RBP5.93□□□□□ -1.46
CHD1-210ENST00000513064 CDH19Q9H159 772 aa5.93□□□□□ -1.46
CHD1-210ENST00000513064 ZNF180Q9UJW8 692 aa5.93□□□□□ -1.46
CHD1-210ENST00000513064 PNMA8BQ9ULN7 279 aaPredicted RBP5.93□□□□□ -1.46
CHD1-210ENST00000513064 TCRBV7S2A1N4TA0A589 114 aa5.92□□□□□ -1.46
CHD1-210ENST00000513064 RNASET2O00584 256 aaKnown RBP5.92□□□□□ -1.46
CHD1-210ENST00000513064 FZD7O75084 574 aa5.92□□□□□ -1.46
CHD1-210ENST00000513064 ZNF202O95125 648 aa5.92□□□□□ -1.46
CHD1-210ENST00000513064 SLC6A2P23975 617 aa5.92□□□□□ -1.46
CHD1-210ENST00000513064 ZFP36P26651 326 aaKnown RBP5.92□□□□□ -1.46
CHD1-210ENST00000513064 FXR1P51114 621 aaKnown RBP eCLIP5.92□□□□□ -1.46
CHD1-210ENST00000513064 PDCD4Q53EL6 469 aaKnown RBP5.92□□□□□ -1.46
CHD1-210ENST00000513064 GADL1Q6ZQY3 521 aa5.92□□□□□ -1.46
CHD1-210ENST00000513064 IL17RDQ8NFM7 739 aa5.92□□□□□ -1.46
CHD1-210ENST00000513064 NLGN4YQ8NFZ3 816 aaPredicted RBP5.92□□□□□ -1.46
CHD1-210ENST00000513064 JPH3Q8WXH2 748 aaPredicted RBP5.92□□□□□ -1.46
CHD1-210ENST00000513064 HAS1Q92839 578 aa5.92□□□□□ -1.46
CHD1-210ENST00000513064 PHACTR3Q96KR7 559 aa5.92□□□□□ -1.46
CHD1-210ENST00000513064 TEX101Q9BY14 249 aa5.92□□□□□ -1.46
CHD1-210ENST00000513064 GTPBP4Q9BZE4 634 aaKnown RBP5.92□□□□□ -1.46
CHD1-210ENST00000513064 GSTO2Q9H4Y5 243 aa5.92□□□□□ -1.46
CHD1-210ENST00000513064 ZNF768Q9H5H4 540 aaKnown RBP5.92□□□□□ -1.46
CHD1-210ENST00000513064 SLC2A4RGQ9NR83 387 aa5.92□□□□□ -1.46
CHD1-210ENST00000513064 FZD1Q9UP38 647 aa5.92□□□□□ -1.46
CHD1-210ENST00000513064 USP15Q9Y4E8 981 aaPredicted RBP5.92□□□□□ -1.46
CHD1-210ENST00000513064 GRM6O15303 877 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 SLC16A6O15403 523 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 DTNBO60941 627 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 RPS6KA4O75676 772 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 RFPL1O75677 317 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 S100BP04271 92 aaPredicted RBP5.91□□□□□ -1.46
CHD1-210ENST00000513064 CT47B1P0C2W7 299 aaPredicted RBP5.91□□□□□ -1.46
CHD1-210ENST00000513064 MTHFD1P11586 935 aaKnown RBP5.91□□□□□ -1.46
CHD1-210ENST00000513064 GCSHP23434 173 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 SLC6A4P31645 630 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 PTGS2P35354 604 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 ACVRL1P37023 503 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 KHDC1Q4VXA5 237 aaKnown RBP5.91□□□□□ -1.46
CHD1-210ENST00000513064 PABPC1LQ4VXU2 614 aaKnown RBP5.91□□□□□ -1.46
CHD1-210ENST00000513064 ATAT1Q5SQI0 421 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 CATIPQ7Z7H3 387 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 OR56A1Q8NGH5 318 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 ZNF483Q8TF39 744 aaPredicted RBP5.91□□□□□ -1.46
CHD1-210ENST00000513064 MYEOVQ96EZ4 313 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 SLC12A5Q9H2X9 1139 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 AKIP1Q9NQ31 210 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 MAN1C1Q9NR34 630 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 KLHL11Q9NVR0 708 aa5.91□□□□□ -1.46
CHD1-210ENST00000513064 MARCH11A6NNE9 402 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 KIAA0391O15091 583 aaKnown RBP5.9□□□□□ -1.46
CHD1-210ENST00000513064 PPFIA4O75335 1185 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 NCR1O76036 304 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 PRSS23O95084 383 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms