RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 PNPLA4P41247 253 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 SLC11A1P49279 550 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 DSC1Q08554 894 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 MYBPC2Q14324 1141 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 TMEM132DQ14C87 1099 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 USP41Q3LFD5 358 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 PUS10Q3MIT2 529 aaKnown RBP8.11□□□□□ -1.11
NR1I3-231ENST00000512340 KMT5BQ4FZB7 885 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 CLEC17AQ6ZS10 378 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 LRRC55Q6ZSA7 311 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 EP400NLQ6ZTU2 488 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 COLGALT2Q8IYK4 626 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 GPR65Q8IYL9 337 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 VPS52Q8N1B4 723 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 GPD1LQ8N335 351 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 XXYLT1Q8NBI6 393 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 ADAMTS19Q8TE59 1207 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 LRRC15Q8TF66 581 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 PPM1EQ8WY54 764 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 ZBTB45Q96K62 511 aaPredicted RBP8.11□□□□□ -1.11
NR1I3-231ENST00000512340 FNBP1Q96RU3 617 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 FIZ1Q96SL8 496 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 UHRF1Q96T88 793 aaPredicted RBP8.11□□□□□ -1.11
NR1I3-231ENST00000512340 TCF25Q9BQ70 676 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 FAM213AQ9BRX8 229 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 STRA6Q9BX79 667 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 TLE6Q9H808 572 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 ALG13Q9NP73 1137 aaKnown RBP8.11□□□□□ -1.11
NR1I3-231ENST00000512340 RBAKQ9NYW8 714 aaPredicted RBP8.11□□□□□ -1.11
NR1I3-231ENST00000512340 ADAM28Q9UKQ2 775 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 PRG3Q9Y2Y8 225 aaPredicted RBP8.11□□□□□ -1.11
NR1I3-231ENST00000512340 HCN4Q9Y3Q4 1203 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 C2CD2Q9Y426 696 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 CITO14578 2027 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 PTPRSQ13332 1948 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 NLRC5Q86WI3 1866 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 MYO7AQ13402 2215 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 TTLL13PA6NNM8 815 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 MEIS3P2A8K0S8 358 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 TMEM189-UBE2V1I3L0A0 370 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 RFXAPO00287 272 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 PDXKO00764 312 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 PSMA7O14818 248 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 EXOC3O60645 756 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 FGFR1OPO95684 399 aaKnown RBP8.1□□□□□ -1.11
NR1I3-231ENST00000512340 MBD3O95983 291 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 SOD2P04179 222 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 ADH1AP07327 375 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 TMEM191BP0C7N4 346 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 CXCL8P10145 99 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 TRIM21P19474 475 aaKnown RBP8.1□□□□□ -1.11
NR1I3-231ENST00000512340 GLUD2P49448 558 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 AP3M2P53677 418 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 DPYDQ12882 1025 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 CCDC85BQ15834 202 aaPredicted RBP8.1□□□□□ -1.11
NR1I3-231ENST00000512340 BMT2Q1RMZ1 405 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 XKR4Q5GH76 650 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 ALKAL1Q6UXT8 129 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 ZNF280BQ86YH2 543 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 NELFCDQ8IXH7 590 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 C12orf56Q8IXR9 622 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 GRAMD1CQ8IYS0 662 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 GUF1Q8N442 669 aaKnown RBP8.1□□□□□ -1.11
NR1I3-231ENST00000512340 APPL2Q8NEU8 664 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 HLA-CQ95604 372 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 ANKRD36BP1Q96IX9 119 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 ZNF560Q96MR9 790 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 PPP1R10Q96QC0 940 aaKnown RBP8.1□□□□□ -1.11
NR1I3-231ENST00000512340 OXCT2Q9BYC2 517 aaPredicted RBP8.1□□□□□ -1.11
NR1I3-231ENST00000512340 DNAI2Q9GZS0 605 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 GOLPH3LQ9H4A5 285 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 DNAJB4Q9UDY4 337 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 DACH1Q9UI36 760 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 CPSF3Q9UKF6 684 aaKnown RBP8.1□□□□□ -1.11
NR1I3-231ENST00000512340 USP20Q9Y2K6 914 aa8.1□□□□□ -1.11
NR1I3-231ENST00000512340 TDRD15B5MCY1 1934 aaKnown RBP8.09□□□□□ -1.11
NR1I3-231ENST00000512340 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.09□□□□□ -1.11
NR1I3-231ENST00000512340 TTC26A0AVF1 554 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 BICDL2A1A5D9 508 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 EPOPA6NHQ4 379 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 CASTOR2A6NHX0 329 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 LACTBL1A8MY62 500 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 NT5C1B-RDH14C9J2C7 533 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 ANKRD63C9JTQ0 380 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 H7C4K7 107 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 PODXLO00592 558 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 ABLIM1O14639 778 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 STX10O60499 249 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 DDHD2O94830 711 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 CLSTN1O94985 981 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 ARHGEF15O94989 841 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 C1RP00736 705 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 CTSAP10619 480 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 KRT13P13646 458 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 KLRC2P26717 231 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 MCM4P33991 863 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 ACOT2P49753 483 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 NDUFV1P49821 464 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 CYP2J2P51589 502 aa8.09□□□□□ -1.11
NR1I3-231ENST00000512340 CASP5P51878 434 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms