RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 NPAS3Q8IXF0 933 aa25.14■■□□□ 1.62
SMAD5-207ENST00000511116 C4orf32Q8N8J7 132 aa25.14■■□□□ 1.62
SMAD5-207ENST00000511116 DDX27Q96GQ7 796 aaKnown RBP25.14■■□□□ 1.62
SMAD5-207ENST00000511116 AVENQ9NQS1 362 aaPredicted RBP25.14■■□□□ 1.62
SMAD5-207ENST00000511116 DNMT3BQ9UBC3 853 aaKnown RBP25.14■■□□□ 1.62
SMAD5-207ENST00000511116 TNFSF13BQ9Y275 285 aa25.14■■□□□ 1.62
SMAD5-207ENST00000511116 B3GAT3O94766 335 aa25.13■■□□□ 1.61
SMAD5-207ENST00000511116 CLCNKBP51801 687 aa25.13■■□□□ 1.61
SMAD5-207ENST00000511116 ZNF174Q15697 407 aa25.13■■□□□ 1.61
SMAD5-207ENST00000511116 MLF2Q15773 248 aaPredicted RBP25.13■■□□□ 1.61
SMAD5-207ENST00000511116 GLRA4Q5JXX5 417 aa25.13■■□□□ 1.61
SMAD5-207ENST00000511116 ALKAL1Q6UXT8 129 aa25.13■■□□□ 1.61
SMAD5-207ENST00000511116 C3orf58Q8NDZ4 430 aa25.13■■□□□ 1.61
SMAD5-207ENST00000511116 IFT74Q96LB3 600 aa25.13■■□□□ 1.61
SMAD5-207ENST00000511116 HCFC1R1Q9NWW0 138 aa25.13■■□□□ 1.61
SMAD5-207ENST00000511116 CDY1Q9Y6F8 540 aa25.13■■□□□ 1.61
SMAD5-207ENST00000511116 COL4A3Q01955 1670 aa25.13■■□□□ 1.61
SMAD5-207ENST00000511116 PATJQ8NI35 1801 aa25.12■■□□□ 1.61
SMAD5-207ENST00000511116 LRRN2O75325 713 aa25.12■■□□□ 1.61
SMAD5-207ENST00000511116 TKTP29401 623 aaKnown RBP25.12■■□□□ 1.61
SMAD5-207ENST00000511116 GUCY1B3Q02153 619 aa25.12■■□□□ 1.61
SMAD5-207ENST00000511116 SNW1Q13573 536 aaKnown RBP25.12■■□□□ 1.61
SMAD5-207ENST00000511116 PABPC1LQ4VXU2 614 aaKnown RBP25.12■■□□□ 1.61
SMAD5-207ENST00000511116 ANKS3Q6ZW76 656 aa25.12■■□□□ 1.61
SMAD5-207ENST00000511116 BHMT2Q9H2M3 363 aa25.12■■□□□ 1.61
SMAD5-207ENST00000511116 PTPRHQ9HD43 1115 aa25.12■■□□□ 1.61
SMAD5-207ENST00000511116 SMIM28A0A1B0GU29 152 aa25.11■■□□□ 1.61
SMAD5-207ENST00000511116 ARHGEF37A1IGU5 675 aa25.11■■□□□ 1.61
SMAD5-207ENST00000511116 GRM5P41594 1212 aa25.11■■□□□ 1.61
SMAD5-207ENST00000511116 TRAPPC10P48553 1259 aa25.11■■□□□ 1.61
SMAD5-207ENST00000511116 PFKPQ01813 784 aa25.11■■□□□ 1.61
SMAD5-207ENST00000511116 ZNF528Q3MIS6 628 aa25.11■■□□□ 1.61
SMAD5-207ENST00000511116 SLC44A4Q53GD3 710 aa25.11■■□□□ 1.61
SMAD5-207ENST00000511116 SLC8B1Q6J4K2 584 aa25.11■■□□□ 1.61
SMAD5-207ENST00000511116 APBB1IPQ7Z5R6 666 aaPredicted RBP25.11■■□□□ 1.61
SMAD5-207ENST00000511116 LLPHQ9BRT6 129 aaKnown RBP25.11■■□□□ 1.61
SMAD5-207ENST00000511116 POLIQ9UNA4 740 aa25.11■■□□□ 1.61
SMAD5-207ENST00000511116 TRAPPC3O43617 180 aa25.1■■□□□ 1.61
SMAD5-207ENST00000511116 TBC1D4O60343 1298 aa25.1■■□□□ 1.61
SMAD5-207ENST00000511116 LIG1P18858 919 aa25.1■■□□□ 1.61
SMAD5-207ENST00000511116 SOX4Q06945 474 aaPredicted RBP25.1■■□□□ 1.61
SMAD5-207ENST00000511116 TTC38Q5R3I4 469 aa25.1■■□□□ 1.61
SMAD5-207ENST00000511116 POTEHQ6S545 545 aa25.1■■□□□ 1.61
SMAD5-207ENST00000511116 FBXO18Q8NFZ0 1043 aa25.1■■□□□ 1.61
SMAD5-207ENST00000511116 KCNG4Q8TDN1 519 aa25.1■■□□□ 1.61
SMAD5-207ENST00000511116 BORCS6Q96GS4 357 aa25.1■■□□□ 1.61
SMAD5-207ENST00000511116 C8orf76Q96K31 380 aa25.1■■□□□ 1.61
SMAD5-207ENST00000511116 ACO2Q99798 780 aaKnown RBP25.1■■□□□ 1.61
SMAD5-207ENST00000511116 CDT1Q9H211 546 aa25.1■■□□□ 1.61
SMAD5-207ENST00000511116 GOLGA2P5Q9HBQ8 144 aa25.1■■□□□ 1.61
SMAD5-207ENST00000511116 POLD4Q9HCU8 107 aa25.1■■□□□ 1.61
SMAD5-207ENST00000511116 GDE1Q9NZC3 331 aa25.1■■□□□ 1.61
SMAD5-207ENST00000511116 PHLPP2Q6ZVD8 1323 aa25.1■■□□□ 1.61
SMAD5-207ENST00000511116 K7ERI5 159 aa25.09■■□□□ 1.61
SMAD5-207ENST00000511116 ECI2O75521 394 aa25.09■■□□□ 1.61
SMAD5-207ENST00000511116 ABLIM3O94929 683 aa25.09■■□□□ 1.61
SMAD5-207ENST00000511116 CCT6AP40227 531 aaKnown RBP25.09■■□□□ 1.61
SMAD5-207ENST00000511116 MAGEA9P43362 315 aa25.09■■□□□ 1.61
SMAD5-207ENST00000511116 PDIA5Q14554 519 aa25.09■■□□□ 1.61
SMAD5-207ENST00000511116 DAW1Q8N136 415 aa25.09■■□□□ 1.61
SMAD5-207ENST00000511116 CEP120Q8N960 986 aa25.09■■□□□ 1.61
SMAD5-207ENST00000511116 IGSF22Q8N9C0 903 aa25.09■■□□□ 1.61
SMAD5-207ENST00000511116 SUMF1Q8NBK3 374 aa25.09■■□□□ 1.61
SMAD5-207ENST00000511116 ZNF461Q8TAF7 563 aa25.09■■□□□ 1.61
SMAD5-207ENST00000511116 KXD1Q9BQD3 176 aa25.09■■□□□ 1.61
SMAD5-207ENST00000511116 TMEM134Q9H6X4 195 aa25.09■■□□□ 1.61
SMAD5-207ENST00000511116 ARHGAP28Q9P2N2 729 aa25.09■■□□□ 1.61
SMAD5-207ENST00000511116 FBXO4Q9UKT5 387 aa25.09■■□□□ 1.61
SMAD5-207ENST00000511116 F5P12259 2224 aa25.08■■□□□ 1.61
SMAD5-207ENST00000511116 ABLIM1O14639 778 aa25.08■■□□□ 1.61
SMAD5-207ENST00000511116 PROZP22891 400 aa25.08■■□□□ 1.61
SMAD5-207ENST00000511116 BRCC3P46736 316 aa25.08■■□□□ 1.61
SMAD5-207ENST00000511116 ROR1Q01973 937 aa25.08■■□□□ 1.61
SMAD5-207ENST00000511116 SLC5A9Q2M3M2 681 aa25.08■■□□□ 1.61
SMAD5-207ENST00000511116 TAS1R3Q7RTX0 852 aa25.08■■□□□ 1.61
SMAD5-207ENST00000511116 CLDN23Q96B33 292 aa25.08■■□□□ 1.61
SMAD5-207ENST00000511116 BCO2Q9BYV7 579 aa25.08■■□□□ 1.61
SMAD5-207ENST00000511116 LTB4R2Q9NPC1 389 aa25.08■■□□□ 1.61
SMAD5-207ENST00000511116 TOPORSQ9NS56 1045 aaPredicted RBP25.08■■□□□ 1.61
SMAD5-207ENST00000511116 LIMCH1Q9UPQ0 1083 aa25.08■■□□□ 1.61
SMAD5-207ENST00000511116 MRPS23Q9Y3D9 190 aaKnown RBP25.08■■□□□ 1.61
SMAD5-207ENST00000511116 MTF2Q9Y483 593 aaPredicted RBP25.08■■□□□ 1.61
SMAD5-207ENST00000511116 I3L4J1 428 aa25.07■■□□□ 1.6
SMAD5-207ENST00000511116 RHOP08100 348 aa25.07■■□□□ 1.6
SMAD5-207ENST00000511116 KCNE1P15382 129 aa25.07■■□□□ 1.6
SMAD5-207ENST00000511116 NPTX2P47972 431 aa25.07■■□□□ 1.6
SMAD5-207ENST00000511116 MRPL58Q14197 206 aaKnown RBP25.07■■□□□ 1.6
SMAD5-207ENST00000511116 RUBCNQ92622 972 aa25.07■■□□□ 1.6
SMAD5-207ENST00000511116 RMDN1Q96DB5 314 aa25.07■■□□□ 1.6
SMAD5-207ENST00000511116 ZMAT2Q96NC0 199 aaKnown RBP25.07■■□□□ 1.6
SMAD5-207ENST00000511116 CCDC94Q9BW85 323 aaPredicted RBP25.07■■□□□ 1.6
SMAD5-207ENST00000511116 DDX19AQ9NUU7 478 aaKnown RBP25.07■■□□□ 1.6
SMAD5-207ENST00000511116 SLC38A7Q9NVC3 462 aa25.07■■□□□ 1.6
SMAD5-207ENST00000511116 LRWD1Q9UFC0 647 aa25.07■■□□□ 1.6
SMAD5-207ENST00000511116 KIAA1024Q9UPX6 916 aa25.07■■□□□ 1.6
SMAD5-207ENST00000511116 STK24Q9Y6E0 443 aa25.07■■□□□ 1.6
SMAD5-207ENST00000511116 CITO14578 2027 aa25.07■■□□□ 1.6
SMAD5-207ENST00000511116 SHISA7A6NL88 538 aa25.06■■□□□ 1.6
SMAD5-207ENST00000511116 SYN3O14994 580 aa25.06■■□□□ 1.6
SMAD5-207ENST00000511116 PRSS36Q5K4E3 855 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms