RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 HERC2P3Q9BVR0 1158 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 FAM13BQ9NYF5 915 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 ADAM28Q9UKQ2 775 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 NCOR1O75376 2440 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 TTC26A0AVF1 554 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 DLL1O00548 723 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 PPEF2O14830 753 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 SOD2P04179 222 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 CNPP09543 421 aaKnown RBP14.81□□□□□ -0.04
SNF8-206ENST00000509989 NDUFV1P49821 464 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 L1TD1Q5T7N2 865 aaKnown RBP14.81□□□□□ -0.04
SNF8-206ENST00000509989 SYCE2Q6PIF2 218 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 GLYCTKQ8IVS8 523 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 C12orf76Q8N812 135 aaPredicted RBP14.81□□□□□ -0.04
SNF8-206ENST00000509989 FSIP1Q8NA03 581 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 ADAMTS19Q8TE59 1207 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 SLC22A17Q8WUG5 538 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 RSPH1Q8WYR4 309 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 SAAL1Q96ER3 474 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 KLHL5Q96PQ7 755 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 MSTO1Q9BUK6 570 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 NGRNQ9NPE2 291 aaKnown RBP14.81□□□□□ -0.04
SNF8-206ENST00000509989 OLFML3Q9NRN5 406 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 CNTN3Q9P232 1028 aa14.81□□□□□ -0.04
SNF8-206ENST00000509989 CPSF3Q9UKF6 684 aaKnown RBP14.81□□□□□ -0.04
SNF8-206ENST00000509989 FAM237AA0A1B0GTK4 181 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 GOLGA8IPA6NC78 632 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 GOLGA8JA6NMD2 632 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 H0YCG3 227 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 OGTO15294 1046 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 ADAM12O43184 909 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 MBTPS2O43462 519 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 WEE2P0C1S8 567 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 KCNE1P15382 129 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 UPP1Q16831 310 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 PTCRAQ6ISU1 281 aaPredicted RBP14.8□□□□□ -0.04
SNF8-206ENST00000509989 EPM2AIP1Q7L775 607 aaPredicted RBP14.8□□□□□ -0.04
SNF8-206ENST00000509989 KHSRPQ92945 711 aaKnown RBP eCLIP14.8□□□□□ -0.048e-7■□□□□ 9
SNF8-206ENST00000509989 CBWD1Q9BRT8 395 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 COLEC11Q9BWP8 271 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 CUEDC2Q9H467 287 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 PCIF1Q9H4Z3 704 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 CHST7Q9NS84 486 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 SEL1LQ9UBV2 794 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 KCNG1Q9UIX4 513 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 HCFC2Q9Y5Z7 792 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 STYXL1Q9Y6J8 313 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 TSC2P49815 1807 aa14.8□□□□□ -0.04
SNF8-206ENST00000509989 BDP1A6H8Y1 2624 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 TADA2AO75478 443 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 NFICP08651 508 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 CLTAP09496 248 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 SLFN14P0C7P3 912 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 SPATA31D3P0C874 917 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 YARSP54577 528 aaKnown RBP14.79□□□□□ -0.04
SNF8-206ENST00000509989 NUCB2P80303 420 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 ZBTB6Q15916 424 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 PDE12Q6L8Q7 609 aaKnown RBP14.79□□□□□ -0.04
SNF8-206ENST00000509989 CNNM4Q6P4Q7 775 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 RSPO2Q6UXX9 243 aaPredicted RBP14.79□□□□□ -0.04
SNF8-206ENST00000509989 SPATA31D4Q6ZUB0 917 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 CCDC65Q8IXS2 484 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 FAM212AQ96EL1 285 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 SCAND2PQ9GZW5 306 aaPredicted RBP14.79□□□□□ -0.04
SNF8-206ENST00000509989 S1PR5Q9H228 398 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 SLC39A2Q9NP94 309 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 IRAK3Q9Y616 596 aa14.79□□□□□ -0.04
SNF8-206ENST00000509989 PODXLO00592 558 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 TEX28O15482 410 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 TGFB1I1O43294 461 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 GADD45BO75293 160 aaPredicted RBP14.78□□□□□ -0.04
SNF8-206ENST00000509989 ADRB2P07550 413 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 GLUD2P49448 558 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 DSG1Q02413 1049 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 FAM26FQ5R3K3 315 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 FAM171A1Q5VUB5 890 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 JADE1Q6IE81 842 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 ANKRD54Q6NXT1 300 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 UNC13DQ70J99 1090 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 NELFCDQ8IXH7 590 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 SCFD1Q8WVM8 642 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 RIN2Q8WYP3 895 aaPredicted RBP14.78□□□□□ -0.04
SNF8-206ENST00000509989 ACCSQ96QU6 501 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 TOPORSQ9NS56 1045 aaPredicted RBP14.78□□□□□ -0.04
SNF8-206ENST00000509989 CD207Q9UJ71 328 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 AGO2Q9UKV8 859 aaKnown RBP14.78□□□□□ -0.04
SNF8-206ENST00000509989 DENND4AQ7Z401 1863 aa14.78□□□□□ -0.04
SNF8-206ENST00000509989 A0A1W2PQ27 194 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 A0A1W2PQ64 194 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 A0A1W2PQD8 194 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 B3GAT3O94766 335 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 TKTP29401 623 aaKnown RBP14.77□□□□□ -0.05
SNF8-206ENST00000509989 SYKP43405 635 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 CLCN4P51793 760 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 STK4Q13043 487 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 KMT5BQ4FZB7 885 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 TMEM184AQ6ZMB5 413 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 APBB1IPQ7Z5R6 666 aaPredicted RBP14.77□□□□□ -0.05
SNF8-206ENST00000509989 CEP57Q86XR8 500 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 PALB2Q86YC2 1186 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms