RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 VPS52Q8N1B4 723 aa21.94■■□□□ 1.1
HOXC6-204ENST00000509328 SPATA20Q8TB22 786 aa21.94■■□□□ 1.1
HOXC6-204ENST00000509328 SMARCE1Q969G3 411 aa21.94■■□□□ 1.1
HOXC6-204ENST00000509328 SAAL1Q96ER3 474 aa21.94■■□□□ 1.1
HOXC6-204ENST00000509328 DDX27Q96GQ7 796 aaKnown RBP21.94■■□□□ 1.1
HOXC6-204ENST00000509328 TCF25Q9BQ70 676 aa21.94■■□□□ 1.1
HOXC6-204ENST00000509328 PCIF1Q9H4Z3 704 aa21.94■■□□□ 1.1
HOXC6-204ENST00000509328 NGRNQ9NPE2 291 aaKnown RBP21.94■■□□□ 1.1
HOXC6-204ENST00000509328 ENTPD7Q9NQZ7 604 aa21.94■■□□□ 1.1
HOXC6-204ENST00000509328 AGPAT3Q9NRZ7 376 aa21.94■■□□□ 1.1
HOXC6-204ENST00000509328 CACNG4Q9UBN1 327 aa21.94■■□□□ 1.1
HOXC6-204ENST00000509328 COL6A3P12111 3177 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 SOX4Q06945 474 aaPredicted RBP21.93■■□□□ 1.1
HOXC6-204ENST00000509328 TCEAL5Q5H9L2 206 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 TMC7Q7Z402 723 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 GPD1LQ8N335 351 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 GOLGA5Q8TBA6 731 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 RABGGTAQ92696 567 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 PPP2R3CQ969Q6 453 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 FAM212AQ96EL1 285 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 KIF12Q96FN5 646 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 VN1R3Q9BXE9 311 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 ZBP1Q9H171 429 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 ASB7Q9H672 318 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 GOLGA2P5Q9HBQ8 144 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 HSPBP1Q9NZL4 362 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 ADAM28Q9UKQ2 775 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 DERAQ9Y315 318 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 PCDHA5Q9Y5H7 936 aa21.93■■□□□ 1.1
HOXC6-204ENST00000509328 F8W810 466 aa21.92■■□□□ 1.1
HOXC6-204ENST00000509328 XPOTO43592 962 aaKnown RBP21.92■■□□□ 1.1
HOXC6-204ENST00000509328 TADA2AO75478 443 aa21.92■■□□□ 1.1
HOXC6-204ENST00000509328 IL18RAPO95256 599 aa21.92■■□□□ 1.1
HOXC6-204ENST00000509328 EFEMP2O95967 443 aa21.92■■□□□ 1.1
HOXC6-204ENST00000509328 RPL9P32969 192 aaKnown RBP21.92■■□□□ 1.1
HOXC6-204ENST00000509328 CLCNKBP51801 687 aa21.92■■□□□ 1.1
HOXC6-204ENST00000509328 SPAG1Q07617 926 aa21.92■■□□□ 1.1
HOXC6-204ENST00000509328 SMC1AQ14683 1233 aaKnown RBP21.92■■□□□ 1.1
HOXC6-204ENST00000509328 ZBTB6Q15916 424 aa21.92■■□□□ 1.1
HOXC6-204ENST00000509328 UPP1Q16831 310 aa21.92■■□□□ 1.1
HOXC6-204ENST00000509328 PLPP4Q5VZY2 271 aa21.92■■□□□ 1.1
HOXC6-204ENST00000509328 DCLRE1AQ6PJP8 1040 aa21.92■■□□□ 1.1
HOXC6-204ENST00000509328 BRSK2Q8IWQ3 736 aa21.92■■□□□ 1.1
HOXC6-204ENST00000509328 C12orf56Q8IXR9 622 aa21.92■■□□□ 1.1
HOXC6-204ENST00000509328 ZSWIM2Q8NEG5 633 aa21.92■■□□□ 1.1
HOXC6-204ENST00000509328 C18orf25Q96B23 403 aaPredicted RBP21.92■■□□□ 1.1
HOXC6-204ENST00000509328 KIAA1586Q9HCI6 787 aa21.92■■□□□ 1.1
HOXC6-204ENST00000509328 UBQLN1Q9UMX0 589 aaKnown RBP21.92■■□□□ 1.1
HOXC6-204ENST00000509328 EYSQ5T1H1 3165 aa21.91■■□□□ 1.1
HOXC6-204ENST00000509328 GOLGA8IPA6NC78 632 aa21.91■■□□□ 1.1
HOXC6-204ENST00000509328 GOLGA8JA6NMD2 632 aa21.91■■□□□ 1.1
HOXC6-204ENST00000509328 TMEM189-UBE2V1I3L0A0 370 aa21.91■■□□□ 1.1
HOXC6-204ENST00000509328 CLIC2O15247 247 aa21.91■■□□□ 1.1
HOXC6-204ENST00000509328 KIF4AO95239 1232 aa21.91■■□□□ 1.1
HOXC6-204ENST00000509328 SOD2P04179 222 aa21.91■■□□□ 1.1
HOXC6-204ENST00000509328 CTSAP10619 480 aa21.91■■□□□ 1.1
HOXC6-204ENST00000509328 CYP3A5P20815 502 aa21.91■■□□□ 1.1
HOXC6-204ENST00000509328 JADE1Q6IE81 842 aa21.91■■□□□ 1.1
HOXC6-204ENST00000509328 FUT10Q6P4F1 479 aa21.91■■□□□ 1.1
HOXC6-204ENST00000509328 RNF168Q8IYW5 571 aaPredicted RBP21.91■■□□□ 1.1
HOXC6-204ENST00000509328 NOC3LQ8WTT2 800 aaKnown RBP21.91■■□□□ 1.1
HOXC6-204ENST00000509328 ERCC4Q92889 916 aaPredicted RBP21.91■■□□□ 1.1
HOXC6-204ENST00000509328 HERC2P3Q9BVR0 1158 aa21.91■■□□□ 1.1
HOXC6-204ENST00000509328 GTPBP4Q9BZE4 634 aaKnown RBP21.91■■□□□ 1.1
HOXC6-204ENST00000509328 KCTD10Q9H3F6 313 aa21.91■■□□□ 1.1
HOXC6-204ENST00000509328 RBAKQ9NYW8 714 aaPredicted RBP21.91■■□□□ 1.1
HOXC6-204ENST00000509328 PCDHGC5Q9Y5F6 944 aa21.91■■□□□ 1.1
HOXC6-204ENST00000509328 SF3B1O75533 1304 aaKnown RBP eCLIP21.9■■□□□ 1.1
HOXC6-204ENST00000509328 PODXLO00592 558 aa21.9■■□□□ 1.1
HOXC6-204ENST00000509328 PDXKO00764 312 aa21.9■■□□□ 1.1
HOXC6-204ENST00000509328 B3GAT3O94766 335 aa21.9■■□□□ 1.1
HOXC6-204ENST00000509328 TMEM132DQ14C87 1099 aa21.9■■□□□ 1.1
HOXC6-204ENST00000509328 SKIV2LQ15477 1246 aaKnown RBP21.9■■□□□ 1.1
HOXC6-204ENST00000509328 ZNF658Q5TYW1 1059 aaPredicted RBP21.9■■□□□ 1.1
HOXC6-204ENST00000509328 ADGRD2Q7Z7M1 963 aa21.9■■□□□ 1.1
HOXC6-204ENST00000509328 GUF1Q8N442 669 aaKnown RBP21.9■■□□□ 1.1
HOXC6-204ENST00000509328 MRPL43Q8N983 215 aaKnown RBP21.9■■□□□ 1.1
HOXC6-204ENST00000509328 FBXL18Q96ME1 805 aa21.9■■□□□ 1.1
HOXC6-204ENST00000509328 LMBRD1Q9NUN5 540 aa21.9■■□□□ 1.1
HOXC6-204ENST00000509328 TUBGCP4Q9UGJ1 667 aa21.9■■□□□ 1.1
HOXC6-204ENST00000509328 C2CD2Q9Y426 696 aa21.9■■□□□ 1.1
HOXC6-204ENST00000509328 IRAK3Q9Y616 596 aa21.9■■□□□ 1.1
HOXC6-204ENST00000509328 VWA8A3KMH1 1905 aa21.9■■□□□ 1.1
HOXC6-204ENST00000509328 ZNF233A6NK53 670 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 GOLGA6L22H0YM25 854 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 NCK2O43639 380 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 CXCL14O95715 111 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 NFICP08651 508 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 LRPAP1P30533 357 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 CYP2J2P51589 502 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 ELAVL2Q12926 359 aaKnown RBP21.89■■□□□ 1.09
HOXC6-204ENST00000509328 SPATA1Q5VX52 437 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 NT5DC4Q86YG4 428 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 XXYLT1Q8NBI6 393 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 BEST2Q8NFU1 509 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 HASPINQ8TF76 798 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 TMEM174Q8WUU8 243 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 GPR62Q9BZJ7 368 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 TLE6Q9H808 572 aa21.89■■□□□ 1.09
HOXC6-204ENST00000509328 MAPK8IP1Q9UQF2 711 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms