RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 ATXN7L2Q5T6C5 722 aaPredicted RBP3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 GIMAP6Q6P9H5 292 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 Q6ZVL8 140 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 MAPKAPK5Q8IW41 473 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 AHI1Q8N157 1196 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 TMEM132CQ8N3T6 1108 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 REPS2Q8NFH8 660 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 WASF1Q92558 559 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 APPBP2Q92624 585 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 PAWRQ96IZ0 340 aaKnown RBP3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 Q96MF0 132 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 KLK15Q9H2R5 256 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 TMEM74BQ9NUR3 256 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 ZNF70Q9UC06 446 aaPredicted RBP3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 SCOCQ9UIL1 159 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 ATP11BQ9Y2G3 1177 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 A0A087X0B3 334 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 CCDC78A2IDD5 438 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 WDR91A4D1P6 747 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 HMGB1P1B2RPK0 211 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 PHF2O75151 1096 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 FOSP01100 380 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 SNRPA1P09661 255 aaKnown RBP3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 RARRES1P49788 294 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 FSCN1Q16658 493 aaKnown RBP3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 SDE2Q6IQ49 451 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 C11orf74Q86VG3 221 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 OR7D4Q8NG98 312 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 HOXB13Q92826 284 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 EAF2Q96CJ1 260 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 MFSD3Q96ES6 412 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 CCDC136Q96JN2 1154 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 FEZ1Q99689 392 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 BRINP2Q9C0B6 783 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 BCO1Q9HAY6 547 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 TOPORSQ9NS56 1045 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 FAM30AQ9NZY2 134 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 FOXJ2Q9P0K8 574 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 KCNG1Q9UIX4 513 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 EDARQ9UNE0 448 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 PLAAQ9Y263 795 aa3.22□□□□□ -1.89
DEPDC1B-204ENST00000509006 A0A1B0GTW7 788 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 MARCH6O60337 910 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 RAB11FIP3O75154 756 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 ZFPL1O95159 310 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 HOXB6P17509 224 aaKnown RBP3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 GCSHP23434 173 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 CACNA2D1P54289 1103 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 SP140Q13342 867 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 TSHZ3Q63HK5 1081 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 ZNF425Q6IV72 752 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 Q6ZNX1 250 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 KIAA0907Q7Z7F0 614 aaPredicted RBP3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 CLRN3Q8NCR9 226 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 GPR156Q8NFN8 814 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 TSPEARQ8WU66 669 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 RIN2Q8WYP3 895 aaPredicted RBP3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 NACC2Q96BF6 587 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 FUBP3Q96I24 572 aaKnown RBP eCLIP3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 BOD1Q96IK1 185 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 PDLIM2Q96JY6 352 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 ZSWIM1Q9BR11 485 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 ALOXE3Q9BYJ1 711 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 MYH16Q9H6N6 1097 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 ASB6Q9NWX5 421 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 DPP7Q9UHL4 492 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 SIK3Q9Y2K2 1263 aa3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 NOC2LQ9Y3T9 749 aaKnown RBP3.21□□□□□ -1.9
DEPDC1B-204ENST00000509006 CACNA1IQ9P0X4 2223 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 PLEKHD1A6NEE1 506 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 ENPP1P22413 925 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 FGFR4P22455 802 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 HSD3B2P26439 372 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 GUCY1A2P33402 732 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 PTPN7P35236 360 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 SREBF1P36956 1147 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 CXADRP78310 365 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 MXRA7P84157 204 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 DHCR24Q15392 516 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 PTPROQ16827 1216 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 UGT8Q16880 541 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 ATP13A4Q4VNC1 1196 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 HSP90AB2PQ58FF8 381 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 AFMIDQ63HM1 303 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 ZNF788Q6ZQV5 615 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 MED25Q71SY5 747 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 DRC7Q8IY82 874 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 ACTRT2Q8TDY3 377 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 PHACTR3Q96KR7 559 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 ACAP3Q96P50 834 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 ORAI2Q96SN7 254 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 SLKQ9H2G2 1235 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 KMT5AQ9NQR1 393 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 IL17RBQ9NRM6 502 aa3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 NOP58Q9Y2X3 529 aaKnown RBP3.2□□□□□ -1.9
DEPDC1B-204ENST00000509006 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 WIPF3A6NGB9 483 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 NEMP1O14524 444 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 AKR1B10O60218 316 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 PROP1O75360 226 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms