RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 ZIM2Q9NZV7 527 aa9.23□□□□□ -0.93
CHD1-205ENST00000508756 TCRBV7S2A1N4TA0A589 114 aa9.22□□□□□ -0.93
CHD1-205ENST00000508756 POMCP01189 267 aa9.22□□□□□ -0.93
CHD1-205ENST00000508756 POU2F2P09086 479 aa9.22□□□□□ -0.93
CHD1-205ENST00000508756 SLC6A2P23975 617 aa9.22□□□□□ -0.93
CHD1-205ENST00000508756 METRNLQ641Q3 311 aa9.22□□□□□ -0.93
CHD1-205ENST00000508756 USP45Q70EL2 814 aa9.22□□□□□ -0.93
CHD1-205ENST00000508756 MED25Q71SY5 747 aa9.22□□□□□ -0.93
CHD1-205ENST00000508756 KRTAP4-2Q9BYR5 136 aa9.22□□□□□ -0.93
CHD1-205ENST00000508756 C11orf54Q9H0W9 315 aaPredicted RBP9.22□□□□□ -0.93
CHD1-205ENST00000508756 TRPM5Q9NZQ8 1165 aa9.22□□□□□ -0.93
CHD1-205ENST00000508756 CHST2Q9Y4C5 530 aa9.22□□□□□ -0.93
CHD1-205ENST00000508756 E2F8A0AVK6 867 aa9.21□□□□□ -0.94
CHD1-205ENST00000508756 LRRC14BA6NHZ5 514 aa9.21□□□□□ -0.94
CHD1-205ENST00000508756 KIAA0391O15091 583 aaKnown RBP9.21□□□□□ -0.94
CHD1-205ENST00000508756 ZNF185O15231 689 aa9.21□□□□□ -0.94
CHD1-205ENST00000508756 RECQL4O94761 1208 aa9.21□□□□□ -0.94
CHD1-205ENST00000508756 FAM189BP81408 668 aa9.21□□□□□ -0.94
CHD1-205ENST00000508756 CREMQ03060 361 aa9.21□□□□□ -0.94
CHD1-205ENST00000508756 TLE1Q04724 770 aa9.21□□□□□ -0.94
CHD1-205ENST00000508756 UBXN2BQ14CS0 331 aa9.21□□□□□ -0.94
CHD1-205ENST00000508756 FAM102AQ5T9C2 384 aaPredicted RBP9.21□□□□□ -0.94
CHD1-205ENST00000508756 GADL1Q6ZQY3 521 aa9.21□□□□□ -0.94
CHD1-205ENST00000508756 PRR18Q8N4B5 295 aa9.21□□□□□ -0.94
CHD1-205ENST00000508756 JDP2Q8WYK2 163 aa9.21□□□□□ -0.94
CHD1-205ENST00000508756 FAM193BQ96PV7 902 aaPredicted RBP9.21□□□□□ -0.94
CHD1-205ENST00000508756 NUP88Q99567 741 aaPredicted RBP9.21□□□□□ -0.94
CHD1-205ENST00000508756 CDH19Q9H159 772 aa9.21□□□□□ -0.94
CHD1-205ENST00000508756 PPM1GO15355 546 aaPredicted RBP9.2□□□□□ -0.94
CHD1-205ENST00000508756 DTNBO60941 627 aa9.2□□□□□ -0.94
CHD1-205ENST00000508756 ITGB1P05556 798 aa9.2□□□□□ -0.94
CHD1-205ENST00000508756 SBK3P0C264 359 aa9.2□□□□□ -0.94
CHD1-205ENST00000508756 NR4A1P22736 598 aa9.2□□□□□ -0.94
CHD1-205ENST00000508756 TUBA3CQ13748 450 aa9.2□□□□□ -0.94
CHD1-205ENST00000508756 RAB39AQ14964 217 aa9.2□□□□□ -0.94
CHD1-205ENST00000508756 LSM12Q3MHD2 195 aaKnown RBP9.2□□□□□ -0.94
CHD1-205ENST00000508756 IGFL4Q6B9Z1 124 aa9.2□□□□□ -0.94
CHD1-205ENST00000508756 TUBA3EQ6PEY2 450 aa9.2□□□□□ -0.94
CHD1-205ENST00000508756 CRIP3Q6Q6R5 217 aa9.2□□□□□ -0.94
CHD1-205ENST00000508756 GDF7Q7Z4P5 450 aa9.2□□□□□ -0.94
CHD1-205ENST00000508756 TTC7BQ86TV6 843 aa9.2□□□□□ -0.94
CHD1-205ENST00000508756 ZNF276Q8N554 614 aa9.2□□□□□ -0.94
CHD1-205ENST00000508756 VRK1Q99986 396 aaPredicted RBP9.2□□□□□ -0.94
CHD1-205ENST00000508756 SLC2A4RGQ9NR83 387 aa9.2□□□□□ -0.94
CHD1-205ENST00000508756 G3BP2Q9UN86 482 aaKnown RBP9.2□□□□□ -0.94
CHD1-205ENST00000508756 USP15Q9Y4E8 981 aaPredicted RBP9.2□□□□□ -0.94
CHD1-205ENST00000508756 NPIPB8E9PQR5 432 aa9.19□□□□□ -0.94
CHD1-205ENST00000508756 GRM6O15303 877 aa9.19□□□□□ -0.94
CHD1-205ENST00000508756 RPS6KA4O75676 772 aa9.19□□□□□ -0.94
CHD1-205ENST00000508756 AKAP5P24588 427 aa9.19□□□□□ -0.94
CHD1-205ENST00000508756 SLC6A4P31645 630 aa9.19□□□□□ -0.94
CHD1-205ENST00000508756 LRRC41Q15345 812 aa9.19□□□□□ -0.94
CHD1-205ENST00000508756 KHDC1Q4VXA5 237 aaKnown RBP9.19□□□□□ -0.94
CHD1-205ENST00000508756 PDCD4Q53EL6 469 aaKnown RBP9.19□□□□□ -0.94
CHD1-205ENST00000508756 DACT2Q5SW24 774 aa9.19□□□□□ -0.94
CHD1-205ENST00000508756 FNDC7Q5VTL7 733 aa9.19□□□□□ -0.94
CHD1-205ENST00000508756 TPH2Q8IWU9 490 aa9.19□□□□□ -0.94
CHD1-205ENST00000508756 Q8N1X5 172 aa9.19□□□□□ -0.94
CHD1-205ENST00000508756 DCLRE1CQ96SD1 692 aaKnown RBP9.19□□□□□ -0.94
CHD1-205ENST00000508756 PRSS23O95084 383 aa9.18□□□□□ -0.94
CHD1-205ENST00000508756 RPLP2P05387 115 aaKnown RBP9.18□□□□□ -0.94
CHD1-205ENST00000508756 CD1AP06126 327 aa9.18□□□□□ -0.94
CHD1-205ENST00000508756 C6P13671 934 aa9.18□□□□□ -0.94
CHD1-205ENST00000508756 VCAM1P19320 739 aa9.18□□□□□ -0.94
CHD1-205ENST00000508756 ZFP36P26651 326 aaKnown RBP9.18□□□□□ -0.94
CHD1-205ENST00000508756 SLC25A43Q8WUT9 341 aaPredicted RBP9.18□□□□□ -0.94
CHD1-205ENST00000508756 GSTO2Q9H4Y5 243 aa9.18□□□□□ -0.94
CHD1-205ENST00000508756 FAM30AQ9NZY2 134 aa9.18□□□□□ -0.94
CHD1-205ENST00000508756 CALCOCO1Q9P1Z2 691 aa9.18□□□□□ -0.94
CHD1-205ENST00000508756 EID1Q9Y6B2 187 aa9.18□□□□□ -0.94
CHD1-205ENST00000508756 TACR2P21452 398 aa9.17□□□□□ -0.94
CHD1-205ENST00000508756 ZNF267Q14586 743 aaPredicted RBP9.17□□□□□ -0.94
CHD1-205ENST00000508756 ATP2B3Q16720 1220 aa9.17□□□□□ -0.94
CHD1-205ENST00000508756 IFIT1BQ5T764 474 aaKnown RBP9.17□□□□□ -0.94
CHD1-205ENST00000508756 AGAP9Q5VTM2 703 aa9.17□□□□□ -0.94
CHD1-205ENST00000508756 MVB12AQ96EY5 273 aa9.17□□□□□ -0.94
CHD1-205ENST00000508756 GPRC5BQ9NZH0 403 aa9.17□□□□□ -0.94
CHD1-205ENST00000508756 PNMA8BQ9ULN7 279 aaPredicted RBP9.17□□□□□ -0.94
CHD1-205ENST00000508756 REXO2Q9Y3B8 237 aaKnown RBP9.17□□□□□ -0.94
CHD1-205ENST00000508756 CDHR4A6H8M9 788 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 NCR1O76036 304 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 ALAS1P13196 640 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 MALP21145 153 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 ZXDAP98168 799 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 PGS1Q32NB8 556 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 LCE5AQ5TCM9 118 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 TSHZ3Q63HK5 1081 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 ZFPM1Q8IX07 1006 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 RHOT2Q8IXI1 618 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 OR56A1Q8NGH5 318 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 RGMAQ96B86 450 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 LRGUKQ96M69 825 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 CAMKK2Q96RR4 588 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 SLC46A2Q9BY10 475 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 SLC12A5Q9H2X9 1139 aa9.16□□□□□ -0.94
CHD1-205ENST00000508756 DIRC3C9JPN6 131 aa9.15□□□□□ -0.94
CHD1-205ENST00000508756 ZNF202O95125 648 aa9.15□□□□□ -0.94
CHD1-205ENST00000508756 SCGB1D2O95969 90 aa9.15□□□□□ -0.94
CHD1-205ENST00000508756 SNAPC2Q13487 334 aa9.15□□□□□ -0.94
CHD1-205ENST00000508756 NFE2Q16621 373 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms