RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 LRRC31Q6UY01 552 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 ARMCX2Q7L311 632 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 FBXO16Q8IX29 292 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 UBL4BQ8N7F7 174 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 GLG1Q92896 1179 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 SAAL1Q96ER3 474 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 SPATA33Q96N06 139 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 CAPS2Q9BXY5 557 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 RAB17Q9H0T7 212 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 TSPYL1Q9H0U9 437 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 THAP2Q9H0W7 228 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 SMARCAD1Q9H4L7 1026 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 FAM114A2Q9NRY5 505 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 FAM153AQ9UHL3 310 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 UTP11Q9Y3A2 253 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 ZNFX1Q9P2E3 1918 aaKnown RBP12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 LRRIQ4A6NIV6 560 aa12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 RTN2O75298 545 aa12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 FGGP02679 453 aa12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 TXNP10599 105 aaKnown RBP12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 CAPSQ13938 189 aa12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 PSMD6Q15008 389 aa12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 CDCA2Q69YH5 1023 aaPredicted RBP12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 ZPBP2Q6X784 338 aa12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 C15orf39Q6ZRI6 1047 aa12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 ARHGEF19Q8IW93 802 aa12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 FBXL13Q8NEE6 735 aa12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 PSPC1Q8WXF1 523 aaKnown RBP12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 EMID1Q96A84 441 aaPredicted RBP12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 DDX47Q9H0S4 455 aaKnown RBP12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 PLEKHA4Q9H4M7 779 aa12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 CTTNBP2NLQ9P2B4 639 aa12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 PCNTO95613 3336 aa12.41□□□□□ -0.42
PRPF40B-203ENST00000508736 BHMG1C9JSJ3 638 aaPredicted RBP12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 DDX3YO15523 660 aaKnown RBP12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 GZMAP12544 262 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 MAP2K2P36507 400 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 USP8P40818 1118 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 PTENP60484 403 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 GPC5P78333 572 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 SKOR1P84550 965 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 LAMC2Q13753 1193 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 PLCB4Q15147 1175 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 TAF1CQ15572 869 aaPredicted RBP12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 TTMPQ5BVD1 217 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 MAMDC4Q6UXC1 1216 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 ENOSF1Q7L5Y1 443 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 RPUSD2Q8IZ73 545 aaKnown RBP12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 SLC20A1Q8WUM9 679 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 ARHGEF26Q96DR7 871 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 RNPC3Q96LT9 517 aaKnown RBP12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 PARK7Q99497 189 aaKnown RBP12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 RAB20Q9NX57 234 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 AGO2Q9UKV8 859 aaKnown RBP12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 A0A0B4J269 797 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 HMGB1P1B2RPK0 211 aaPredicted RBP12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 ZBTB42B2RXF5 422 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 HBP1O60381 514 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 ERLIN2O94905 339 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 FTLP02792 175 aaPredicted RBP12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 ADORA2AP29274 412 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 PRPF4BQ13523 1007 aaKnown RBP12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 FAM110CQ1W6H9 321 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 TAPT1Q6NXT6 567 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 SV2AQ7L0J3 742 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 FAM71AQ8IYT1 594 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 PPM1KQ8N3J5 372 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 PRPF31Q8WWY3 499 aaKnown RBP12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 SHC3Q92529 594 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 CCDC127Q96BQ5 260 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 NT5C1BQ96P26 610 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 FAM213AQ9BRX8 229 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 C2orf40Q9H1Z8 148 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 TAS2R14Q9NYV8 317 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 RASAL2Q9UJF2 1139 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 IVNS1ABPQ9Y6Y0 642 aa12.4□□□□□ -0.42
PRPF40B-203ENST00000508736 CEP350Q5VT06 3117 aa12.4□□□□□ -0.43
PRPF40B-203ENST00000508736 ADGRA2Q96PE1 1338 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 PLXNB2O15031 1838 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 MTA2O94776 668 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 KRT14P02533 472 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 PDE6CP51160 858 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 IRAK1P51617 712 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 GCNT1Q02742 428 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 MAP2K1Q02750 393 aaPredicted RBP12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 ARHGAP1Q07960 439 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 DHX34Q14147 1143 aaKnown RBP12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 SMYD5Q6GMV2 418 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 EPS8L1Q8TE68 723 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 SEC14L1Q92503 715 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 ARL8AQ96BM9 186 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 RPS6KC1Q96S38 1066 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 CCDC113Q9H0I3 377 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 AMACRQ9UHK6 382 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 PLAAQ9Y263 795 aa12.39□□□□□ -0.43
PRPF40B-203ENST00000508736 FAM187AA6NFU0 413 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 EIF3HO15372 352 aaKnown RBP eCLIP12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 ASAP2O43150 1006 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms