RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 GDE1Q9NZC3 331 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 RGL1Q9NZL6 768 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 KLK14Q9P0G3 267 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 DNMT3BQ9UBC3 853 aaKnown RBP10.42□□□□□ -0.74
NEDD9-211ENST00000508546 RAB23Q9ULC3 237 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 IGSF10Q6WRI0 2623 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 ZBTB39O15060 712 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 ADAM12O43184 909 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 KIF4AO95239 1232 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 DEXIO95424 95 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 NPTXRO95502 500 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 RETP07949 1114 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 RPS6KB1P23443 525 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 ARL2P36404 184 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 CCT2P78371 535 aaKnown RBP10.41□□□□□ -0.74
NEDD9-211ENST00000508546 SSRP1Q08945 709 aaKnown RBP10.41□□□□□ -0.74
NEDD9-211ENST00000508546 PPP2R5DQ14738 602 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 CSRP2Q16527 193 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 IL31Q6EBC2 164 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.41□□□□□ -0.74
NEDD9-211ENST00000508546 CEP57Q86XR8 500 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 ZNF687Q8N1G0 1237 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 ASAP3Q8TDY4 903 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 HAS1Q92839 578 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 ELSPBP1Q96BH3 223 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 PLA2G2FQ9BZM2 168 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 HEBP1Q9NRV9 189 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 HCFC1R1Q9NWW0 138 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 CACNG4Q9UBN1 327 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 PARP2Q9UGN5 583 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 MRPS23Q9Y3D9 190 aaKnown RBP10.41□□□□□ -0.74
NEDD9-211ENST00000508546 CITO14578 2027 aa10.41□□□□□ -0.74
NEDD9-211ENST00000508546 CASTOR2A6NHX0 329 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 TMEM189-UBE2V1I3L0A0 370 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 MAN2B1O00754 1011 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 PTGESO14684 152 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 TM4SF5O14894 197 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 B4GALT5O43286 388 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 DGAT1O75907 488 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 LYPLA2O95372 231 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 THP07101 528 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 SPINK2P20155 84 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 FGFR3P22607 806 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 GLRA2P23416 452 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 OR1D2P34982 312 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 SPIRE1Q08AE8 756 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 CTTNQ14247 550 aaKnown RBP10.4□□□□□ -0.74
NEDD9-211ENST00000508546 NAB2Q15742 525 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 CCDC6Q16204 474 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 PPP4R3CPQ6ZMV5 832 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 PRR23BQ6ZRT6 265 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 NEK8Q86SG6 692 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 CDR2LQ86X02 465 aaPredicted RBP10.4□□□□□ -0.74
NEDD9-211ENST00000508546 HASPINQ8TF76 798 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 ING5Q8WYH8 240 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 DYDC2Q96IM9 177 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 PRIMPOLQ96LW4 560 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 NAP1L4Q99733 375 aaKnown RBP10.4□□□□□ -0.74
NEDD9-211ENST00000508546 TRPV5Q9NQA5 729 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 ANKEF1Q9NU02 776 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 MTRRQ9UBK8 725 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 SNX14Q9Y5W7 946 aa10.4□□□□□ -0.74
NEDD9-211ENST00000508546 CCDC194A0A1B0GVG4 234 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 TMEM8BA6NDV4 472 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 FOXD2O60548 495 aaPredicted RBP10.39□□□□□ -0.75
NEDD9-211ENST00000508546 SLITRK3O94933 977 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 RHOP08100 348 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 HSPA4P34932 840 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 RBM25P49756 843 aaKnown RBP10.39□□□□□ -0.75
NEDD9-211ENST00000508546 CCR3P51677 355 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 CYP4A11Q02928 519 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 FAM187BQ17R55 369 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 SLC5A9Q2M3M2 681 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 SOWAHCQ53LP3 525 aaPredicted RBP10.39□□□□□ -0.75
NEDD9-211ENST00000508546 NCAPH2Q6IBW4 605 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 TANGO2Q6ICL3 276 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 POTEHQ6S545 545 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 TPH2Q8IWU9 490 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 SLFN12Q8IYM2 578 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 ZCCHC14Q8WYQ9 949 aaKnown RBP10.39□□□□□ -0.75
NEDD9-211ENST00000508546 GATA6Q92908 595 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 MCRS1Q96EZ8 462 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 ADAM33Q9BZ11 813 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 RXFP3Q9NSD7 469 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 PRMT7Q9NVM4 692 aaPredicted RBP10.39□□□□□ -0.75
NEDD9-211ENST00000508546 DAXXQ9UER7 740 aaPredicted RBP10.39□□□□□ -0.75
NEDD9-211ENST00000508546 NDRG2Q9UN36 371 aaKnown RBP10.39□□□□□ -0.75
NEDD9-211ENST00000508546 WASF3Q9UPY6 502 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 BACE2Q9Y5Z0 518 aa10.39□□□□□ -0.75
NEDD9-211ENST00000508546 ARHGEF37A1IGU5 675 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 MARCH6O60337 910 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 CCNT1O60563 726 aaKnown RBP10.38□□□□□ -0.75
NEDD9-211ENST00000508546 CDC45O75419 566 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 RECQL4O94761 1208 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 MICAL2O94851 1124 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 KCNK5O95279 499 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 BAG4O95429 457 aaKnown RBP10.38□□□□□ -0.75
NEDD9-211ENST00000508546 PTPN2P17706 415 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 FCARP24071 287 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 PSMA5P28066 241 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms