RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 VAV2P52735 878 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 IL2P60568 153 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 HSD11B2P80365 405 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 MAPK7Q13164 816 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 C21orf62-AS1Q17RA5 79 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 Q6ZVL8 140 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 C11orf74Q86VG3 221 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 RASSF3Q86WH2 238 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 THNSL2Q86YJ6 484 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 NINJ1Q92982 152 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 PTCD3Q96EY7 689 aaKnown RBP6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 UROC1Q96N76 676 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 MRI1Q9BV20 369 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 ASB6Q9NWX5 421 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 DMTF1Q9Y222 760 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 AATKQ6ZMQ8 1374 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 ADSLP30566 484 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC13-209ENST00000508304 PDCD1Q15116 288 aa6.05□□□□□ -1.44
TRAPPC13-209ENST00000508304 AFMIDQ63HM1 303 aa6.05□□□□□ -1.44
TRAPPC13-209ENST00000508304 PPM1KQ8N3J5 372 aa6.05□□□□□ -1.44
TRAPPC13-209ENST00000508304 FBXO18Q8NFZ0 1043 aa6.05□□□□□ -1.44
TRAPPC13-209ENST00000508304 OR2W6PQ8NHA6 318 aa6.05□□□□□ -1.44
TRAPPC13-209ENST00000508304 RIN2Q8WYP3 895 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC13-209ENST00000508304 APPBP2Q92624 585 aa6.05□□□□□ -1.44
TRAPPC13-209ENST00000508304 SLC5A5Q92911 643 aa6.05□□□□□ -1.44
TRAPPC13-209ENST00000508304 HEPHQ9BQS7 1158 aa6.05□□□□□ -1.44
TRAPPC13-209ENST00000508304 IL17RBQ9NRM6 502 aa6.05□□□□□ -1.44
TRAPPC13-209ENST00000508304 SIK3Q9Y2K2 1263 aa6.05□□□□□ -1.44
TRAPPC13-209ENST00000508304 NOC2LQ9Y3T9 749 aaKnown RBP6.05□□□□□ -1.44
TRAPPC13-209ENST00000508304 AKR1B10O60218 316 aa6.04□□□□□ -1.44
TRAPPC13-209ENST00000508304 PRSS23O95084 383 aa6.04□□□□□ -1.44
TRAPPC13-209ENST00000508304 POMCP01189 267 aa6.04□□□□□ -1.44
TRAPPC13-209ENST00000508304 UBXN2BQ14CS0 331 aa6.04□□□□□ -1.44
TRAPPC13-209ENST00000508304 GPR156Q8NFN8 814 aa6.04□□□□□ -1.44
TRAPPC13-209ENST00000508304 EAF2Q96CJ1 260 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC13-209ENST00000508304 TIMP4Q99727 224 aa6.04□□□□□ -1.44
TRAPPC13-209ENST00000508304 TARS2Q9BW92 718 aaKnown RBP6.04□□□□□ -1.44
TRAPPC13-209ENST00000508304 ZNF70Q9UC06 446 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC13-209ENST00000508304 USP25Q9UHP3 1055 aa6.04□□□□□ -1.44
TRAPPC13-209ENST00000508304 SLC6A2P23975 617 aa6.03□□□□□ -1.44
TRAPPC13-209ENST00000508304 SREBF1P36956 1147 aa6.03□□□□□ -1.44
TRAPPC13-209ENST00000508304 FSCN1Q16658 493 aaKnown RBP6.03□□□□□ -1.44
TRAPPC13-209ENST00000508304 UGT8Q16880 541 aa6.03□□□□□ -1.44
TRAPPC13-209ENST00000508304 C16orf86Q6ZW13 317 aa6.03□□□□□ -1.44
TRAPPC13-209ENST00000508304 AHI1Q8N157 1196 aa6.03□□□□□ -1.44
TRAPPC13-209ENST00000508304 ZNF366Q8N895 744 aa6.03□□□□□ -1.44
TRAPPC13-209ENST00000508304 RNPC3Q96LT9 517 aaKnown RBP6.03□□□□□ -1.44
TRAPPC13-209ENST00000508304 PIF1Q9H611 641 aa6.03□□□□□ -1.44
TRAPPC13-209ENST00000508304 EDARQ9UNE0 448 aa6.03□□□□□ -1.44
TRAPPC13-209ENST00000508304 ZFPL1O95159 310 aa6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 ATP5JP18859 108 aa6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 TKFCQ3LXA3 575 aa6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 AKNAD1Q5T1N1 836 aa6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 KIAA0895LQ68EN5 471 aa6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 ZNF425Q6IV72 752 aa6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 FOXR2Q6PJQ5 311 aa6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 PTF1AQ7RTS3 328 aa6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 SSH3Q8TE77 659 aa6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 KRTAP1-5Q9BYS1 174 aa6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 FANCLQ9NW38 375 aa6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 MOCS1Q9NZB8 636 aa6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 DPP7Q9UHL4 492 aa6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 MTO1Q9Y2Z2 717 aaKnown RBP6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 ENTPD2Q9Y5L3 495 aa6.02□□□□□ -1.45
TRAPPC13-209ENST00000508304 ERN1O75460 977 aaKnown RBP6.01□□□□□ -1.45
TRAPPC13-209ENST00000508304 RAP2AP10114 183 aa6.01□□□□□ -1.45
TRAPPC13-209ENST00000508304 IL2RBP14784 551 aa6.01□□□□□ -1.45
TRAPPC13-209ENST00000508304 WT1P19544 449 aaPredicted RBP6.01□□□□□ -1.45
TRAPPC13-209ENST00000508304 ECHS1P30084 290 aa6.01□□□□□ -1.45
TRAPPC13-209ENST00000508304 GUCY1A2P33402 732 aa6.01□□□□□ -1.45
TRAPPC13-209ENST00000508304 FOLR3P41439 243 aa6.01□□□□□ -1.45
TRAPPC13-209ENST00000508304 GJC2Q5T442 439 aaPredicted RBP6.01□□□□□ -1.45
TRAPPC13-209ENST00000508304 OTUD7BQ6GQQ9 843 aa6.01□□□□□ -1.45
TRAPPC13-209ENST00000508304 NIM1KQ8IY84 436 aa6.01□□□□□ -1.45
TRAPPC13-209ENST00000508304 COLGALT2Q8IYK4 626 aa6.01□□□□□ -1.45
TRAPPC13-209ENST00000508304 SARAFQ96BY9 339 aa6.01□□□□□ -1.45
TRAPPC13-209ENST00000508304 RAX2Q96IS3 184 aa6.01□□□□□ -1.45
TRAPPC13-209ENST00000508304 FBXO34Q9NWN3 711 aa6.01□□□□□ -1.45
TRAPPC13-209ENST00000508304 WDR91A4D1P6 747 aa6□□□□□ -1.45
TRAPPC13-209ENST00000508304 PEX1O43933 1283 aa6□□□□□ -1.45
TRAPPC13-209ENST00000508304 CDC45O75419 566 aa6□□□□□ -1.45
TRAPPC13-209ENST00000508304 CKBP12277 381 aa6□□□□□ -1.45
TRAPPC13-209ENST00000508304 ALDH1A3P47895 512 aa6□□□□□ -1.45
TRAPPC13-209ENST00000508304 CDK17Q00537 523 aa6□□□□□ -1.45
TRAPPC13-209ENST00000508304 CPEB4Q17RY0 729 aaKnown RBP eCLIP6□□□□□ -1.45
TRAPPC13-209ENST00000508304 TAF7LQ5H9L4 462 aa6□□□□□ -1.45
TRAPPC13-209ENST00000508304 GRASPQ7Z6J2 395 aaPredicted RBP6□□□□□ -1.45
TRAPPC13-209ENST00000508304 TSPEARQ8WU66 669 aa6□□□□□ -1.45
TRAPPC13-209ENST00000508304 DPF1Q92782 380 aa6□□□□□ -1.45
TRAPPC13-209ENST00000508304 HOXB13Q92826 284 aaPredicted RBP6□□□□□ -1.45
TRAPPC13-209ENST00000508304 SLC23A1Q9UHI7 598 aa6□□□□□ -1.45
TRAPPC13-209ENST00000508304 SCOCQ9UIL1 159 aa6□□□□□ -1.45
TRAPPC13-209ENST00000508304 CELA2AP08217 269 aa5.99□□□□□ -1.45
TRAPPC13-209ENST00000508304 HMGB1P09429 215 aaKnown RBP5.99□□□□□ -1.45
TRAPPC13-209ENST00000508304 ENPP1P22413 925 aa5.99□□□□□ -1.45
TRAPPC13-209ENST00000508304 GEN1Q17RS7 908 aa5.99□□□□□ -1.45
TRAPPC13-209ENST00000508304 KIAA1614Q5VZ46 1190 aa5.99□□□□□ -1.45
TRAPPC13-209ENST00000508304 ZNF529Q6P280 563 aa5.99□□□□□ -1.45
TRAPPC13-209ENST00000508304 DHX37Q8IY37 1157 aaKnown RBP5.99□□□□□ -1.45
TRAPPC13-209ENST00000508304 PQLC1Q8N2U9 271 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms