RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 STK4Q13043 487 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 PDE1CQ14123 709 aaPredicted RBP6.54□□□□□ -1.36
PDE4D-216ENST00000507116 GRIK5Q16478 980 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 NFIL3Q16649 462 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 TIGD2Q4W5G0 525 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 STON2Q8WXE9 905 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 NCLNQ969V3 563 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 HDAC11Q96DB2 347 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 MNTQ99583 582 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 BTBD2Q9BX70 525 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 RHOBTB2Q9BYZ6 727 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 RNF41Q9H4P4 317 aaPredicted RBP6.54□□□□□ -1.36
PDE4D-216ENST00000507116 SIAEQ9HAT2 523 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 PAQR5Q9NXK6 330 aaPredicted RBP6.54□□□□□ -1.36
PDE4D-216ENST00000507116 SENP1Q9P0U3 644 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 TBC1D14Q9P2M4 693 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 PCDH11XQ9BZA7 1347 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 A6NCN8 305 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 SMIM23A6NLE4 172 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 CAPN14A8MX76 684 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 POLR1CO15160 346 aaPredicted RBP6.54□□□□□ -1.36
PDE4D-216ENST00000507116 TCEA3O75764 348 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 CYP17A1P05093 508 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 HPGDP15428 266 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 DNAJB1P25685 340 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 HADHAP40939 763 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 SLC9A3P48764 834 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 VPS41P49754 854 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 PEX3P56589 373 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 SRP54P61011 504 aaKnown RBP6.54□□□□□ -1.36
PDE4D-216ENST00000507116 CYP4F2P78329 520 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 CYP4F3Q08477 520 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 C19orf57Q0VDD7 668 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 GALNTL6Q49A17 601 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 METTL24Q5JXM2 366 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 NET1Q7Z628 596 aaPredicted RBP6.54□□□□□ -1.36
PDE4D-216ENST00000507116 FERMT3Q86UX7 667 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 IQCKQ8N0W5 287 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 REXO1Q8N1G1 1221 aaKnown RBP6.54□□□□□ -1.36
PDE4D-216ENST00000507116 TTC13Q8NBP0 860 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 TSEN2Q8NCE0 465 aaKnown RBP6.54□□□□□ -1.36
PDE4D-216ENST00000507116 FANK1Q8TC84 345 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 RASSF5Q8WWW0 418 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 SLC9A6Q92581 669 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 TSR2Q969E8 191 aaKnown RBP6.54□□□□□ -1.36
PDE4D-216ENST00000507116 FAR2Q96K12 515 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 USP28Q96RU2 1077 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 PIP5K1AQ99755 562 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 USB1Q9BQ65 265 aaKnown RBP6.54□□□□□ -1.36
PDE4D-216ENST00000507116 PSD2Q9BQI7 771 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 FAM117AQ9C073 453 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 HAUS4Q9H6D7 363 aa6.54□□□□□ -1.36
PDE4D-216ENST00000507116 INTS9Q9NV88 658 aaKnown RBP6.54□□□□□ -1.36
PDE4D-216ENST00000507116 DAPK1P53355 1430 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 ITSN2Q9NZM3 1697 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 PNMA6EA0A0J9YXQ4 647 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 A6NJY4 79 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 ZNF233A6NK53 670 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 PHF20L1A8MW92 1017 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 SLC9A3R1O14745 358 aaPredicted RBP6.53□□□□□ -1.36
PDE4D-216ENST00000507116 RAD51BO15315 384 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 ECE2O60344 883 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 SIN3BO75182 1162 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 ZMYND10O75800 440 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 ESRRBO95718 433 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 C6orf222P0C671 652 aaPredicted RBP6.53□□□□□ -1.36
PDE4D-216ENST00000507116 TNFRSF8P28908 595 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 LRPAP1P30533 357 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 HNRNPMP52272 730 aaKnown RBP eCLIP6.53□□□□□ -1.362e-6■■■□□ 14.7
PDE4D-216ENST00000507116 ACY1Q03154 408 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 FCHO2Q0JRZ9 810 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 SCRN3Q0VDG4 424 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 MTF1Q14872 753 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 TXNRD1Q16881 649 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 SLC4A10Q6U841 1118 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 OLFM4Q6UX06 510 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 DCDC5Q6ZRR9 648 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 IKBIPQ70UQ0 350 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 PIGWQ7Z7B1 504 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 ADAMTSL2Q86TH1 951 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 GALNT11Q8NCW6 608 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 LTV1Q96GA3 475 aaPredicted RBP6.53□□□□□ -1.36
PDE4D-216ENST00000507116 ZNF184Q99676 751 aaPredicted RBP6.53□□□□□ -1.36
PDE4D-216ENST00000507116 KCNN2Q9H2S1 579 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 GHITMQ9H3K2 345 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 SLITRK6Q9H5Y7 841 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 CNOT10Q9H9A5 744 aaKnown RBP6.53□□□□□ -1.36
PDE4D-216ENST00000507116 GPRC5BQ9NZH0 403 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 MAPRE3Q9UPY8 281 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 SNX8Q9Y5X2 465 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 IQGAP2Q13576 1575 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 NDUFA2O43678 99 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 KRT5P13647 590 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 GFAPP14136 432 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 POU2F1P14859 743 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 PLBD1Q6P4A8 553 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 POMZP3Q6PJE2 187 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 CRTC1Q6UUV9 634 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 GLRX5Q86SX6 157 aa6.53□□□□□ -1.36
PDE4D-216ENST00000507116 AGGF1Q8N302 714 aaeCLIP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms