RNA–Protein interactions for RNA: ENST00000507017.5

SFXN1-206, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-206ENST00000507017 PCDHGC5Q9Y5F6 944 aa8.36□□□□□ -1.07
SFXN1-206ENST00000507017 GTF3C3Q9Y5Q9 886 aa8.36□□□□□ -1.07
SFXN1-206ENST00000507017 CLIC4Q9Y696 253 aa8.36□□□□□ -1.07
SFXN1-206ENST00000507017 ZFP37Q9Y6Q3 630 aaPredicted RBP8.36□□□□□ -1.07
SFXN1-206ENST00000507017 PODXLO00592 558 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 PTGESO14684 152 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 TEX28O15482 410 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 KIF4AO95239 1232 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 POU2F2P09086 479 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 ZSCAN22P10073 491 aaPredicted RBP8.35□□□□□ -1.07
SFXN1-206ENST00000507017 HARSP12081 509 aaKnown RBP8.35□□□□□ -1.07
SFXN1-206ENST00000507017 EPCAMP16422 314 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 CYP3A5P20815 502 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 MARCKSP29966 332 aaPredicted RBP8.35□□□□□ -1.07
SFXN1-206ENST00000507017 ELF1P32519 619 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 GTF2BQ00403 316 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 CEBPZQ03701 1054 aaKnown RBP8.35□□□□□ -1.07
SFXN1-206ENST00000507017 UVSSAQ2YD98 709 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 XKR4Q5GH76 650 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 FAM171A1Q5VUB5 890 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 ZNF280DQ6N043 979 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 GPR149Q86SP6 731 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 CEP57Q86XR8 500 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 MAP4K3Q8IVH8 894 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 SUGP1Q8IWZ8 645 aaKnown RBP8.35□□□□□ -1.07
SFXN1-206ENST00000507017 ZDHHC14Q8IZN3 488 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 GSTCDQ8NEC7 633 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 BEST2Q8NFU1 509 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 BCL7CQ8WUZ0 217 aaPredicted RBP8.35□□□□□ -1.07
SFXN1-206ENST00000507017 AUTS2Q8WXX7 1259 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 RPGRIP1Q96KN7 1286 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 ACCSQ96QU6 501 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 MSTO1Q9BUK6 570 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 ASB7Q9H672 318 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 TMEM206Q9H813 350 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 MRPL44Q9H9J2 332 aaKnown RBP8.35□□□□□ -1.07
SFXN1-206ENST00000507017 TSHZ2Q9NRE2 1034 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 OLFML3Q9NRN5 406 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 BLOC1S4Q9NUP1 217 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 BACE2Q9Y5Z0 518 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 UNC80Q8N2C7 3258 aa8.35□□□□□ -1.07
SFXN1-206ENST00000507017 CITO14578 2027 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 SFI1A8K8P3 1242 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 B4GALT3O60512 393 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 LILRB3O75022 631 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 IL18RAPO95256 599 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 EFEMP2O95967 443 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 F13A1P00488 732 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 IDEP14735 1019 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 FGFR3P22607 806 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 MCM4P33991 863 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 ME1P48163 572 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 AFF1P51825 1210 aaKnown RBP8.34□□□□□ -1.07
SFXN1-206ENST00000507017 NUBP1P53384 320 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 OSTNP61366 133 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 SIGLEC14Q08ET2 396 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 PTPN21Q16825 1174 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 UPP1Q16831 310 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 GLRA4Q5JXX5 417 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 USP37Q86T82 979 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 SYCP3Q8IZU3 236 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 ELMOD1Q8N336 334 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 LINC00301Q8NCQ3 95 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 KREMEN2Q8NCW0 462 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 SMG7Q92540 1137 aaKnown RBP8.34□□□□□ -1.07
SFXN1-206ENST00000507017 DDX12PQ92771 950 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 EDAQ92838 391 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 CCDC47Q96A33 483 aaKnown RBP8.34□□□□□ -1.07
SFXN1-206ENST00000507017 KIF12Q96FN5 646 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 EPSTI1Q96J88 318 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 ZNF560Q96MR9 790 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 USP28Q96RU2 1077 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 VN1R3Q9BXE9 311 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 GPR62Q9BZJ7 368 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 IRF2BPLQ9H1B7 796 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 FOXD4L1Q9NU39 408 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 MIOSQ9NXC5 875 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.34□□□□□ -1.07
SFXN1-206ENST00000507017 IGSF9Q9P2J2 1179 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 USP25Q9UHP3 1055 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 FBXW11Q9UKB1 542 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 DSEQ9UL01 958 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 SORCS3Q9UPU3 1222 aa8.34□□□□□ -1.07
SFXN1-206ENST00000507017 BDP1A6H8Y1 2624 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 PRUNE2Q8WUY3 3088 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 CLUHO75153 1309 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 UBE4BO95155 1302 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 A0A0B4J269 797 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 CCDC195A0A1B0GUA6 201 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 TTLL13PA6NNM8 815 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 ZMYND10O75800 440 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 KIF20AO95235 890 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 LRG1P02750 347 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 MYL1P05976 194 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 LRPAP1P30533 357 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 PNPLA4P41247 253 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 CLCNKBP51801 687 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 SNRPFP62306 86 aaKnown RBP8.33□□□□□ -1.08
SFXN1-206ENST00000507017 KRT85P78386 507 aa8.33□□□□□ -1.08
SFXN1-206ENST00000507017 PLD1Q13393 1074 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms