RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 CT47A1Q5JQC4 288 aaPredicted RBP3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 PRAMEF14Q5SWL7 426 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 ABHD15Q6UXT9 468 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 SPATS2Q86XZ4 545 aaKnown RBP3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 PRPF38AQ8NAV1 312 aaKnown RBP3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 CLRN3Q8NCR9 226 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 SIMC1Q8NDZ2 872 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 CAGE1Q8TC20 777 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 SNX33Q8WV41 574 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 SLC9A6Q92581 669 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 SLC5A5Q92911 643 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 PAWRQ96IZ0 340 aaKnown RBP3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 DKK2Q9UBU2 259 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 MCM8Q9UJA3 840 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 CDY2AQ9Y6F7 541 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 MARCH11A6NNE9 402 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 TRIM38O00635 465 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 PRKD3O94806 890 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 GASTP01350 101 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 LPLP06858 475 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 CRHR1P34998 444 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 PTPN7P35236 360 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 FLT3LGP49771 235 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 LGALS4P56470 323 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 RAP2BP61225 183 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 ERVK-21P61565 698 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 TMPRSS15P98073 1019 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 TRIM25Q14258 630 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 ATXN7L2Q5T6C5 722 aaPredicted RBP3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 FAM102AQ5T9C2 384 aaPredicted RBP3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 NECAB2Q7Z6G3 386 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 FAM98AQ8NCA5 519 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 COG1Q8WTW3 980 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 RNF31Q96EP0 1072 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 CEP95Q96GE4 821 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 DUSP26Q9BV47 211 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 REXO4Q9GZR2 422 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 KCTD10Q9H3F6 313 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 NOC2LQ9Y3T9 749 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 PHLDB1Q86UU1 1377 aa3.63□□□□□ -1.83
TOPBP1-205ENST00000506779 ULK1O75385 1050 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 CFIP05156 583 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 SNRPA1P09661 255 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 EGR2P11161 476 aaPredicted RBP3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 CDK11BP21127 795 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 CTSSP25774 331 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 CLRN1P58418 232 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 MFSD14BQ5SR56 506 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 AGAP9Q5VTM2 703 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 BROXQ5VW32 411 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 ARHGEF25Q86VW2 580 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 MAPKAPK5Q8IW41 473 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 OR56A1Q8NGH5 318 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 WDR66Q8TBY9 1149 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 NEU1Q99519 415 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 LRFN3Q9BTN0 628 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 ALOXE3Q9BYJ1 711 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 VTA1Q9NP79 307 aa3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 NOP58Q9Y2X3 529 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-205ENST00000506779 DRGXA6NNA5 263 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 PJA2O43164 708 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 ADCY6O43306 1168 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 PHF2O75151 1096 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 CPEP16870 476 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 CCKBRP32239 447 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 SESN3P58005 492 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 PDCD1Q15116 288 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 KRTAP27-1Q3LI81 207 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 CT83Q5H943 113 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 PITRM1Q5JRX3 1037 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 RNF219Q5W0B1 726 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 MED25Q71SY5 747 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 LYSMD2Q8IV50 215 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 RHOT2Q8IXI1 618 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 SLC35B2Q8TB61 432 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 ZCRB1Q8TBF4 217 aaKnown RBP3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 Q96MF0 132 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 UHRF1Q96T88 793 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 ZSWIM1Q9BR11 485 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 CASS4Q9NQ75 786 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 TOPORSQ9NS56 1045 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 TBCCD1Q9NVR7 557 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 LRIT1Q9P2V4 623 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 TMPRSS11EQ9UL52 423 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 MAST3O60307 1309 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 RPTORQ8N122 1335 aa3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 ARHGEF17Q96PE2 2063 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-205ENST00000506779 SCRIBQ14160 1630 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 CXorf49A8MYA2 514 aaPredicted RBP3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 MPLP40238 635 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 MRPS35P82673 323 aaKnown RBP3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 MTMR1Q13613 665 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 UGT8Q16880 541 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 MST1LQ2TV78 715 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 FAM47AQ5JRC9 791 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 RRP12Q5JTH9 1297 aaKnown RBP3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 TSHZ3Q63HK5 1081 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms