RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 PSMD6Q15008 389 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 SURF1Q15526 300 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 JADE1Q6IE81 842 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 SPRED2Q7Z698 418 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 NT5DC4Q86YG4 428 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 EFCAB13Q8IY85 973 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 PLEKHO2Q8TD55 490 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 NOC3LQ8WTT2 800 aaKnown RBP13.94□□□□□ -0.18
TCOF1-210ENST00000506767 FAM212AQ96EL1 285 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 BORCS6Q96GS4 357 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 CEP63Q96MT8 703 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 TMEM175Q9BSA9 504 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 MKNK1Q9BUB5 465 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 GZF1Q9H116 711 aaPredicted RBP13.94□□□□□ -0.18
TCOF1-210ENST00000506767 SLC28A3Q9HAS3 691 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 PDE11AQ9HCR9 933 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 SLC38A7Q9NVC3 462 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 DNAJB4Q9UDY4 337 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 FRMD4BQ9Y2L6 1034 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 RWDD3Q9Y3V2 267 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 C2CD2Q9Y426 696 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 TMEM265A0A087WTH1 108 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 SYCE3A1L190 88 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 GALTP07902 379 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 NFICP08651 508 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 CYP3A5P20815 502 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 PSMC2P35998 433 aaKnown RBP13.93□□□□□ -0.18
TCOF1-210ENST00000506767 BMPR1AP36894 532 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 BCAR1P56945 870 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 CLDN10P78369 228 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 ENPEPQ07075 957 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 SPAG1Q07617 926 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 ZSCAN23Q3MJ62 389 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 SPATA1Q5VX52 437 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 CEP135Q66GS9 1140 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 PPP2R2DQ66LE6 453 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 KCNT2Q6UVM3 1135 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 C11orf57Q6ZUT1 292 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-210ENST00000506767 FILIP1Q7Z7B0 1213 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 COLGALT1Q8NBJ5 622 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 PARD3BQ8TEW8 1205 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 C18orf25Q96B23 403 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-210ENST00000506767 KIF12Q96FN5 646 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 EEF2KMTQ96G04 330 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 SAMD11Q96NU1 681 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 FAM193BQ96PV7 902 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-210ENST00000506767 TGS1Q96RS0 853 aaKnown RBP13.93□□□□□ -0.18
TCOF1-210ENST00000506767 C17orf80Q9BSJ5 609 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 PLVAPQ9BX97 442 aa13.93□□□□□ -0.18
TCOF1-210ENST00000506767 UBQLN1Q9UMX0 589 aaKnown RBP13.93□□□□□ -0.18
TCOF1-210ENST00000506767 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-210ENST00000506767 CARNS1A5YM72 827 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 NRP1O14786 923 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 SLC16A3O15427 465 aaKnown RBP13.92□□□□□ -0.18
TCOF1-210ENST00000506767 ZC3H11AO75152 810 aaKnown RBP eCLIP13.92□□□□□ -0.18
TCOF1-210ENST00000506767 ALDH2P05091 517 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 RB1P06400 928 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 CCDC192P0DO97 292 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 LRPAP1P30533 357 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 SLC11A1P49279 550 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 TMEM132DQ14C87 1099 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 EPC2Q52LR7 807 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 GPR153Q6NV75 609 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 FAM186BQ8IYM0 893 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 SLC39A11Q8N1S5 342 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 CSGALNACT2Q8N6G5 542 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 TMC2Q8TDI7 906 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 FAM161BQ96MY7 647 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 UROC1Q96N76 676 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 ZNF558Q96NG5 402 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 CGRRF1Q99675 332 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 PAAF1Q9BRP4 392 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 AAASQ9NRG9 546 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 TUBGCP4Q9UGJ1 667 aa13.92□□□□□ -0.18
TCOF1-210ENST00000506767 PTPRJQ12913 1337 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 XPOTO43592 962 aaKnown RBP13.91□□□□□ -0.18
TCOF1-210ENST00000506767 EFEMP2O95967 443 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 EPB41P11171 864 aaKnown RBP13.91□□□□□ -0.18
TCOF1-210ENST00000506767 RPL9P32969 192 aaKnown RBP13.91□□□□□ -0.18
TCOF1-210ENST00000506767 PBX3P40426 434 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 ALDH7A1P49419 539 aaKnown RBP13.91□□□□□ -0.18
TCOF1-210ENST00000506767 MARSP56192 900 aaKnown RBP13.91□□□□□ -0.18
TCOF1-210ENST00000506767 UPP1Q16831 310 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 C1orf220Q5T0J3 134 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 SPOUT1Q5T280 376 aaKnown RBP13.91□□□□□ -0.18
TCOF1-210ENST00000506767 INTS8Q75QN2 995 aaKnown RBP13.91□□□□□ -0.18
TCOF1-210ENST00000506767 WDR49Q8IV35 697 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 TMEM130Q8N3G9 435 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 CXorf38Q8TB03 319 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 ENOX1Q8TC92 643 aaKnown RBP13.91□□□□□ -0.18
TCOF1-210ENST00000506767 ZNF516Q92618 1163 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 DDX27Q96GQ7 796 aaKnown RBP13.91□□□□□ -0.18
TCOF1-210ENST00000506767 POP1Q99575 1024 aaKnown RBP13.91□□□□□ -0.18
TCOF1-210ENST00000506767 SRRTQ9BXP5 876 aaKnown RBP13.91□□□□□ -0.18
TCOF1-210ENST00000506767 DNAJC25Q9H1X3 360 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 TTYH1Q9H313 450 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-210ENST00000506767 ZNF576Q9H609 170 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 GOLGA2P5Q9HBQ8 144 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 INTS13Q9NVM9 706 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 CACNG4Q9UBN1 327 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms