RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 TFAMQ00059 246 aaKnown RBP12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 ARID5AQ03989 594 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 NCOA4Q13772 614 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 HIC1Q14526 733 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 ARHGAP44Q17R89 818 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 SGSM1Q2NKQ1 1148 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 SEZ6Q53EL9 994 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 ZBTB41Q5SVQ8 909 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 TDRD10Q5VZ19 366 aaKnown RBP12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 PHLDB3Q6NSJ2 640 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 ZNF662Q6ZS27 426 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 USP38Q8NB14 1042 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 ZNF516Q92618 1163 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 DHX38Q92620 1227 aaKnown RBP12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 FAXDC2Q96IV6 333 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 C16orf45Q96MC5 204 aaPredicted RBP12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 DESI2Q9BSY9 194 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 STARD7Q9NQZ5 370 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 CHST12Q9NRB3 414 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 WBP1LQ9NX94 342 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 PIN4Q9Y237 131 aaKnown RBP12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 CDY2AQ9Y6F7 541 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 CITO14578 2027 aa12.96□□□□□ -0.34
POLR2J3-211ENST00000506060 KIF5CO60282 957 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 RPS6KA5O75582 802 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 LCA5LO95447 670 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 CXCL8P10145 99 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 HOXA11P31270 313 aaPredicted RBP12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 THPOP40225 353 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 APBA1Q02410 837 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 KIF5AQ12840 1032 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 BMS1Q14692 1282 aaKnown RBP12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 TMEM132DQ14C87 1099 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 HGSNATQ68CP4 663 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 LMBRD2Q68DH5 695 aaPredicted RBP12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 LHX8Q68G74 356 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 GJB7Q6PEY0 223 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 FAM43BQ6ZT52 329 aaPredicted RBP12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 TRAPPC11Q7Z392 1133 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 IRF2BP2Q7Z5L9 587 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 CDR2LQ86X02 465 aaPredicted RBP12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 REXO1L1PQ8IX06 675 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 PPP1R13LQ8WUF5 828 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 SEMA4DQ92854 862 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 IFIH1Q9BYX4 1025 aaKnown RBP12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 CDHR5Q9HBB8 845 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 MYO1AQ9UBC5 1043 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 PHF24Q9UPV7 400 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 C2CD2Q9Y426 696 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 SQORQ9Y6N5 450 aa12.95□□□□□ -0.34
POLR2J3-211ENST00000506060 USP27XA6NNY8 438 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 LACTBL1A8MY62 500 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 RBAK-RBAKDNI3L0D1 243 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 DNM1LO00429 736 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 EVI5O60447 810 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 P4HA1P13674 534 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 ZSCAN20P17040 1043 aaPredicted RBP12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 FGFR4P22455 802 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 ATICP31939 592 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 USP8P40818 1118 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 VAV2P52735 878 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 SLC18A3Q16572 532 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 TWF2Q6IBS0 349 aaKnown RBP12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 NYAP1Q6ZVC0 841 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 ARHGEF19Q8IW93 802 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 ACRBPQ8NEB7 543 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 OR5B17Q8NGF7 314 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 KIF18AQ8NI77 898 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 SHC3Q92529 594 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 MTMR12Q9C0I1 747 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 SENP6Q9GZR1 1112 aaPredicted RBP12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 TSKSQ9UJT2 592 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 ITGA11Q9UKX5 1188 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 PAXBP1Q9Y5B6 917 aa12.94□□□□□ -0.34
POLR2J3-211ENST00000506060 ATP8B3O60423 1300 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 FRMPD3Q5JV73 1810 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 A0A1W2PQ45 241 aaPredicted RBP12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 A0A1W2PQY0 241 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 ARVCFO00192 962 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 FOXN3O00409 490 aaPredicted RBP12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 SKIP12755 728 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 TNFAIP3P21580 790 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 MAGEA1P43355 309 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 RAB27AP51159 221 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 ETF1P62495 437 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 NOP14P78316 857 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 PTK2Q05397 1052 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 FAM26DQ5JW98 314 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 CCDC122Q5T0U0 273 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 JADE1Q6IE81 842 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 FAM71AQ8IYT1 594 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 TTC39CQ8N584 583 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 CEP120Q8N960 986 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 BEST2Q8NFU1 509 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 HELQQ8TDG4 1101 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 SH3TC2Q8TF17 1288 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 LZTFL1Q9NQ48 299 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 NOC2LQ9Y3T9 749 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms