RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 RPP25Q9BUL9 199 aaKnown RBP13.41□□□□□ -0.26
SNHG4-202ENST00000505522 TARS2Q9BW92 718 aaKnown RBP13.41□□□□□ -0.26
SNHG4-202ENST00000505522 RAB34Q9BZG1 259 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 TMEM134Q9H6X4 195 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.41□□□□□ -0.26
SNHG4-202ENST00000505522 ARHGAP28Q9P2N2 729 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 MTRRQ9UBK8 725 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 POLIQ9UNA4 740 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 STK24Q9Y6E0 443 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 NUMBLQ9Y6R0 609 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 ZFHX2Q9C0A1 2572 aaPredicted RBP13.41□□□□□ -0.26
SNHG4-202ENST00000505522 TRIP11Q15643 1979 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 PRR23AA6NEV1 266 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 SFI1A8K8P3 1242 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 STK25O00506 426 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 ABLIM1O14639 778 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 HOXA9P31269 272 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 PRPHP41219 470 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 DMP1Q13316 513 aaPredicted RBP13.4□□□□□ -0.26
SNHG4-202ENST00000505522 ANGPT1Q15389 498 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 ZNF568Q3ZCX4 644 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 PARM1Q6UWI2 310 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 DTHD1Q6ZMT9 781 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 C1orf186Q6ZWK4 172 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 APBB1IPQ7Z5R6 666 aaPredicted RBP13.4□□□□□ -0.26
SNHG4-202ENST00000505522 ITFG1Q8TB96 612 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 FGF14Q92915 247 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 DDX27Q96GQ7 796 aaKnown RBP13.4□□□□□ -0.26
SNHG4-202ENST00000505522 DRC1Q96MC2 740 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 UROC1Q96N76 676 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 ZMAT2Q96NC0 199 aaKnown RBP13.4□□□□□ -0.26
SNHG4-202ENST00000505522 MRPL4Q9BYD3 311 aaKnown RBP13.4□□□□□ -0.26
SNHG4-202ENST00000505522 TBC1D17Q9HA65 648 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 KMT5AQ9NQR1 393 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 HCFC1R1Q9NWW0 138 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 CDY1Q9Y6F8 540 aa13.4□□□□□ -0.26
SNHG4-202ENST00000505522 ZFP37Q9Y6Q3 630 aaPredicted RBP13.4□□□□□ -0.26
SNHG4-202ENST00000505522 LAD1O00515 517 aa13.39□□□□□ -0.27
SNHG4-202ENST00000505522 SLC16A4O15374 487 aa13.39□□□□□ -0.27
SNHG4-202ENST00000505522 MEFVO15553 781 aaPredicted RBP13.39□□□□□ -0.27
SNHG4-202ENST00000505522 XYLBO75191 536 aa13.39□□□□□ -0.27
SNHG4-202ENST00000505522 PROZP22891 400 aa13.39□□□□□ -0.27
SNHG4-202ENST00000505522 YARSP54577 528 aaKnown RBP13.39□□□□□ -0.27
SNHG4-202ENST00000505522 UVSSAQ2YD98 709 aa13.39□□□□□ -0.27
SNHG4-202ENST00000505522 FGF13Q92913 245 aa13.39□□□□□ -0.27
SNHG4-202ENST00000505522 ZBTB45Q96K62 511 aaPredicted RBP13.39□□□□□ -0.27
SNHG4-202ENST00000505522 SNX27Q96L92 541 aa13.39□□□□□ -0.27
SNHG4-202ENST00000505522 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
SNHG4-202ENST00000505522 SLC2A4RGQ9NR83 387 aa13.39□□□□□ -0.27
SNHG4-202ENST00000505522 TOPORSQ9NS56 1045 aaPredicted RBP13.39□□□□□ -0.27
SNHG4-202ENST00000505522 DNMT3BQ9UBC3 853 aaKnown RBP13.39□□□□□ -0.27
SNHG4-202ENST00000505522 DAXXQ9UER7 740 aaPredicted RBP13.39□□□□□ -0.27
SNHG4-202ENST00000505522 CDH7Q9ULB5 785 aa13.39□□□□□ -0.27
SNHG4-202ENST00000505522 PODXLO00592 558 aa13.38□□□□□ -0.27
SNHG4-202ENST00000505522 TRAPPC3O43617 180 aa13.38□□□□□ -0.27
SNHG4-202ENST00000505522 POU2F2P09086 479 aa13.38□□□□□ -0.27
SNHG4-202ENST00000505522 MCF2P10911 925 aa13.38□□□□□ -0.27
SNHG4-202ENST00000505522 ATP2C1P98194 919 aaPredicted RBP13.38□□□□□ -0.27
SNHG4-202ENST00000505522 RAD51AP2Q09MP3 1159 aa13.38□□□□□ -0.27
SNHG4-202ENST00000505522 ZRSR1Q15695 479 aaKnown RBP13.38□□□□□ -0.27
SNHG4-202ENST00000505522 MCTP1Q6DN14 999 aa13.38□□□□□ -0.27
SNHG4-202ENST00000505522 C18orf25Q96B23 403 aaPredicted RBP13.38□□□□□ -0.27
SNHG4-202ENST00000505522 ACAP3Q96P50 834 aa13.38□□□□□ -0.27
SNHG4-202ENST00000505522 PNMA5Q96PV4 448 aa13.38□□□□□ -0.27
SNHG4-202ENST00000505522 TCHPQ9BT92 498 aa13.38□□□□□ -0.27
SNHG4-202ENST00000505522 ARHGEF3Q9NR81 526 aa13.38□□□□□ -0.27
SNHG4-202ENST00000505522 RBM19Q9Y4C8 960 aaKnown RBP13.38□□□□□ -0.27
SNHG4-202ENST00000505522 BACE2Q9Y5Z0 518 aa13.38□□□□□ -0.27
SNHG4-202ENST00000505522 NOTCH4Q99466 2003 aa13.38□□□□□ -0.27
SNHG4-202ENST00000505522 COL4A3Q01955 1670 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 MYH15Q9Y2K3 1946 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 DCNP07585 359 aaKnown RBP13.37□□□□□ -0.27
SNHG4-202ENST00000505522 HARSP12081 509 aaKnown RBP13.37□□□□□ -0.27
SNHG4-202ENST00000505522 KCNE1P15382 129 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 RFX1P22670 979 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 GUCY2CP25092 1073 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 GPC5P78333 572 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 ROR1Q01973 937 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 PABPC1LQ4VXU2 614 aaKnown RBP13.37□□□□□ -0.27
SNHG4-202ENST00000505522 SEZ6Q53EL9 994 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 SPECC1Q5M775 1068 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 VARS2Q5ST30 1063 aaKnown RBP13.37□□□□□ -0.27
SNHG4-202ENST00000505522 HYIQ5T013 277 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 PHLDB3Q6NSJ2 640 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 MPZL3Q6UWV2 235 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 ANKS3Q6ZW76 656 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 NPAS3Q8IXF0 933 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 SYT2Q8N9I0 419 aaPredicted RBP13.37□□□□□ -0.27
SNHG4-202ENST00000505522 NKD2Q969F2 451 aaPredicted RBP13.37□□□□□ -0.27
SNHG4-202ENST00000505522 PLIN2Q99541 437 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 NTPCRQ9BSD7 190 aaKnown RBP13.37□□□□□ -0.27
SNHG4-202ENST00000505522 C17orf75Q9HAS0 396 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 SLC38A7Q9NVC3 462 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 DLGAP2Q9P1A6 1054 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 CNTN3Q9P232 1028 aa13.37□□□□□ -0.27
SNHG4-202ENST00000505522 WDR27A2RRH5 827 aa13.36□□□□□ -0.27
SNHG4-202ENST00000505522 VWA3AA6NCI4 1184 aa13.36□□□□□ -0.27
SNHG4-202ENST00000505522 TBC1D4O60343 1298 aa13.36□□□□□ -0.27
SNHG4-202ENST00000505522 CD2BP2O95400 341 aaKnown RBP13.36□□□□□ -0.27
SNHG4-202ENST00000505522 MAPTP10636 758 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms