RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 B3GAT3O94766 335 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 LRG1P02750 347 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 PSMC3P17980 439 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 FGFR3P22607 806 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 PDIA3P30101 505 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 ELF1P32519 619 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 SHC2P98077 582 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 SSRP1Q08945 709 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 SPIRE1Q08AE8 756 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 AASDHQ4L235 1098 aaPredicted RBP12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 PRSS36Q5K4E3 855 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 HEATR6Q6AI08 1181 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 LONP2Q86WA8 852 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 TRIM22Q8IYM9 498 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 SPEM1Q8N4L4 309 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 FAM160A2Q8N612 972 aaPredicted RBP12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 ZNF461Q8TAF7 563 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 HAS1Q92839 578 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 TCEAL4Q96EI5 215 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 JAKMIP1Q96N16 626 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 TRPV5Q9NQA5 729 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 ZMYM2Q9UBW7 1377 aa12.8□□□□□ -0.36
CCHCR1-219ENST00000505392 ZNF197O14709 1029 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 TM4SF5O14894 197 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 AXIN1O15169 862 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 DGAT1O75907 488 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 NAB2Q15742 525 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 NPY5RQ15761 445 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 PPP4R3AQ6IN85 833 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 GALNT17Q6IS24 598 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 BLOC1S2Q6QNY1 142 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 VITQ6UXI7 678 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 CEP68Q76N32 757 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 KRT25Q7Z3Z0 450 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 ZSWIM3Q96MP5 696 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 ASB16Q96NS5 453 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 BACE2Q9Y5Z0 518 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 NID2Q14112 1375 aa12.79□□□□□ -0.36
CCHCR1-219ENST00000505392 TDRD15B5MCY1 1934 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 NOTCH4Q99466 2003 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 A0A087WWV3 80 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 ARHGEF37A1IGU5 675 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 K7ESF4 209 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 PRRG1O14668 218 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 ZNF263O14978 683 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 TBX3O15119 743 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 CCNT1O60563 726 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 RECQL4O94761 1208 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 MICAL2O94851 1124 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 PROS1P07225 676 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 TKTP29401 623 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 VIPR2P41587 438 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 CCR2P41597 374 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 CLCNKBP51801 687 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 LIMK1P53667 647 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 ARPP19P56211 112 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 SF3A2Q15428 464 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 CCDC6Q16204 474 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 CYP4A22Q5TCH4 519 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 ANKS3Q6ZW76 656 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 PDZD4Q76G19 769 aaPredicted RBP12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 MAEAQ7L5Y9 396 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 NEK8Q86SG6 692 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 NOSTRINQ8IVI9 506 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 FBXL16Q8N461 479 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 C12orf50Q8NA57 414 aaPredicted RBP12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 DAGLBQ8NCG7 672 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 SMARCD2Q92925 531 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 AIFM3Q96NN9 605 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 AGXT2Q9BYV1 514 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 ARRDC1-AS1Q9H2J1 176 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 RXFP3Q9NSD7 469 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 RBM12Q9NTZ6 932 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 PRMT7Q9NVM4 692 aaPredicted RBP12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 F5P12259 2224 aa12.78□□□□□ -0.36
CCHCR1-219ENST00000505392 CCDC194A0A1B0GVG4 234 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 WDR27A2RRH5 827 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 LRRIQ4A6NIV6 560 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 TTLL13PA6NNM8 815 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 I3L4J1 428 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 TRAPPC3O43617 180 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 ABLIM3O94929 683 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 DEXIO95424 95 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 HOXB3P14651 431 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 ATF2P15336 505 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 ROR1Q01973 937 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 PTGDRQ13258 359 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 TMEM132AQ24JP5 1023 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 CD300LGQ6UXG3 332 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 DEPDC1BQ8WUY9 529 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 DDX27Q96GQ7 796 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 PRIMPOLQ96LW4 560 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 EIF2AK1Q9BQI3 630 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 POLR3FQ9H1D9 316 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 FZD8Q9H461 694 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 CYP4F11Q9HBI6 524 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 ANKEF1Q9NU02 776 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 KCNJ14Q9UNX9 436 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 USP20Q9Y2K6 914 aa12.77□□□□□ -0.37
CCHCR1-219ENST00000505392 GDAQ9Y2T3 454 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms