RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 C17orf75Q9HAS0 396 aa12.21□□□□□ -0.45
UBE2D3-219ENST00000505207 GDE1Q9NZC3 331 aa12.21□□□□□ -0.45
UBE2D3-219ENST00000505207 MTRRQ9UBK8 725 aa12.21□□□□□ -0.45
UBE2D3-219ENST00000505207 CACNG4Q9UBN1 327 aa12.21□□□□□ -0.45
UBE2D3-219ENST00000505207 KIAA1024Q9UPX6 916 aa12.21□□□□□ -0.45
UBE2D3-219ENST00000505207 KANSL1LA0AUZ9 987 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 TTLL13PA6NNM8 815 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 H7C4K7 107 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 LAD1O00515 517 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 NCAM2O15394 837 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 DCNP07585 359 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 GRM5P41594 1212 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 MAGEA9P43362 315 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 GPC5P78333 572 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 DMP1Q13316 513 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 NAB2Q15742 525 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 UPP1Q16831 310 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 SLC44A4Q53GD3 710 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 KRT79Q5XKE5 535 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 EEF1DP3Q658K8 133 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 PARM1Q6UWI2 310 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 CCDC83Q8IWF9 413 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 PJA1Q8NG27 643 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 DRC1Q96MC2 740 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 PPP1R10Q96QC0 940 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 MRPL4Q9BYD3 311 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 OSBPL6Q9BZF3 934 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 TMEM134Q9H6X4 195 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 SH2B1Q9NRF2 756 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 DDX19AQ9NUU7 478 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 MRPS17Q9Y2R5 130 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 MRPS23Q9Y3D9 190 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 CDY1Q9Y6F8 540 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 PLXNA3P51805 1871 aa12.2□□□□□ -0.46
UBE2D3-219ENST00000505207 SMIM28A0A1B0GU29 152 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 PRRG1O14668 218 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 ZNF197O14709 1029 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 LRG1P02750 347 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 PTPN2P17706 415 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 RPL9P32969 192 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 CLCNKBP51801 687 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 PEX3P56589 373 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 NTHL1P78549 312 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 SNW1Q13573 536 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 MLF2Q15773 248 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 ZNF568Q3ZCX4 644 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 NT5DC1Q5TFE4 455 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 ZNF461Q8TAF7 563 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 SNX29Q8TEQ0 813 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 FGF14Q92915 247 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 ACAP3Q96P50 834 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 HINFPQ9BQA5 517 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 TIPINQ9BVW5 301 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 KMT5AQ9NQR1 393 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 MAFFQ9ULX9 164 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 KIF3AQ9Y496 699 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 NUB1Q9Y5A7 615 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 USP34Q70CQ2 3546 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 CFAP54Q96N23 3096 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 SPTBN4Q9H254 2564 aa12.19□□□□□ -0.46
UBE2D3-219ENST00000505207 SYN3O14994 580 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 ADAM12O43184 909 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 LAMTOR5O43504 91 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 ECI2O75521 394 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 SP9P0CG40 484 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 MCF2P10911 925 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 NPTX2P47972 431 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 SMTNP53814 917 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 STRN3Q13033 797 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 GLRA4Q5JXX5 417 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 DTHD1Q6ZMT9 781 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 ELMOD1Q8N336 334 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 KCTD17Q8N5Z5 321 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 APPL2Q8NEU8 664 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 ITFG1Q8TB96 612 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 ACO2Q99798 780 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 KIFC3Q9BVG8 833 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 AVENQ9NQS1 362 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 SPATA6Q9NWH7 488 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 DLGAP2Q9P1A6 1054 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 DNMT3BQ9UBC3 853 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 FBXO4Q9UKT5 387 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 USP20Q9Y2K6 914 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 R4GN57 208 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 DOCK8Q8NF50 2099 aa12.18□□□□□ -0.46
UBE2D3-219ENST00000505207 ARHGEF37A1IGU5 675 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 FAM170BA6NMN3 283 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 H0YCG3 227 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 PODXLO00592 558 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 KINO60870 393 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 MICAL2O94851 1124 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 RHOP08100 348 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 KCNE1P15382 129 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 TKTP29401 623 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 MARCKSP29966 332 aaPredicted RBP12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 PTGDRQ13258 359 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 UBXN2BQ14CS0 331 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 ZNF528Q3MIS6 628 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 XKR4Q5GH76 650 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms