RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 SPATA16Q9BXB7 569 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 CALN1Q9BXU9 219 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 STMN4Q9H169 189 aaPredicted RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ABI2Q9NYB9 513 aaPredicted RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 IMPACTQ9P2X3 320 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 TDRKHQ9Y2W6 561 aaKnown RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 TIAM2Q8IVF5 1701 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 CACNA1FO60840 1977 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 ECM29Q5VYK3 1845 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 FER1L6Q2WGJ9 1857 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 VILLO15195 856 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 SRGAP2O75044 1071 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 FTCDO95954 541 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 GAS8O95995 478 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 HSPD1P10809 573 aaKnown RBP3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 EPB41P11171 864 aaKnown RBP3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 MYCLP12524 364 aaPredicted RBP3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 POU3F3P20264 500 aaPredicted RBP3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 SAT1P21673 171 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 GSTT1P30711 240 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 CHKAP35790 457 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 RFC5P40937 340 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 MTTPP55157 894 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 MDM2Q00987 491 aaPredicted RBP3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 NIPAL4Q0D2K0 466 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 PTGDRQ13258 359 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 GNA13Q14344 377 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 GCKRQ14397 625 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 MTF1Q14872 753 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 CLUL1Q15846 466 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 FAM133BQ5BKY9 247 aaKnown RBP3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 DUPD1Q68J44 220 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 PDE12Q6L8Q7 609 aaKnown RBP3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 HIBCHQ6NVY1 386 aaPredicted RBP3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 DCUN1D2Q6PH85 259 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 COL23A1Q86Y22 540 aaPredicted RBP3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 MYCT1Q8N699 235 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 ATP8B4Q8TF62 1192 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 NRG4Q8WWG1 115 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 GLMNQ92990 594 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 GJA10Q969M2 543 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 TIPINQ9BVW5 301 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 LSM14BQ9BX40 385 aaKnown RBP3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 OSBPL1AQ9BXW6 950 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 MTFR1LQ9H019 292 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 LRRC4CQ9HCJ2 640 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 EPB41L5Q9HCM4 733 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 SEC31BQ9NQW1 1179 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 IL20Q9NYY1 176 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 PFDN2Q9UHV9 154 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 INTUQ9ULD6 942 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 MAGED2Q9UNF1 606 aaPredicted RBP3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 RPH3AQ9Y2J0 694 aaPredicted RBP3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 FADS3Q9Y5Q0 445 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 MAP3K15Q6ZN16 1313 aa3.9□□□□□ -1.78
PCDH11X-208ENST00000504220 NEURL1BA8MQ27 555 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 POC1B-GALNT4F8VUJ3 575 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 FBP2O00757 339 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 NVLO15381 856 aaKnown RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 ATXN8OSP0DMR3 200 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 FDX1P10109 184 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 TKTP29401 623 aaKnown RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 GGCXP38435 758 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 ARHGAP25P42331 645 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 PLCD1P51178 756 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 AMPD2Q01433 879 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 RBL2Q08999 1139 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 C2orf54Q08AI8 447 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 TBL3Q12788 808 aaKnown RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 BRD3Q15059 726 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 GALNTL6Q49A17 601 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 KLHL35Q6PF15 583 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 NSMFQ6X4W1 530 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 CCDC81Q6ZN84 652 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 AGMOQ6ZNB7 445 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC16A12Q6ZSM3 486 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 TPH2Q8IWU9 490 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 TRIML2Q8N7C3 387 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 TTLQ8NG68 377 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 PGBD1Q96JS3 809 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 SIAEQ9HAT2 523 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 MLXIPLQ9NP71 852 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 THAP1Q9NVV9 213 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 IL37Q9NZH6 218 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 DTLQ9NZJ0 730 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 ADAM22Q9P0K1 906 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 ARPP21Q9UBL0 812 aaPredicted RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 MYH7BA7E2Y1 1941 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 RIC1Q4ADV7 1423 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 MYO5AQ9Y4I1 1855 aaKnown RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 TNRC6CQ9HCJ0 1690 aaKnown RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 A0A0G2JLW4 131 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 TARSL2A2RTX5 802 aaKnown RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 WDR91A4D1P6 747 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 H0YIN7 160 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 AXIN1O15169 862 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 PRPF3O43395 683 aaKnown RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 OPHN1O60890 802 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 INMTO95050 263 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 HOXB1P14653 301 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms