RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 KLHL10Q6JEL2 608 aa19.75■□□□□ 0.75
DDR1-252ENST00000504152 SASS6Q6UVJ0 657 aa19.75■□□□□ 0.75
DDR1-252ENST00000504152 RBM43Q6ZSC3 357 aaKnown RBP19.75■□□□□ 0.75
DDR1-252ENST00000504152 BRSK2Q8IWQ3 736 aa19.75■□□□□ 0.75
DDR1-252ENST00000504152 KIF12Q96FN5 646 aa19.75■□□□□ 0.75
DDR1-252ENST00000504152 ZMAT2Q96NC0 199 aaKnown RBP19.75■□□□□ 0.75
DDR1-252ENST00000504152 C11orf84Q9BUA3 381 aaPredicted RBP19.75■□□□□ 0.75
DDR1-252ENST00000504152 COLEC11Q9BWP8 271 aa19.75■□□□□ 0.75
DDR1-252ENST00000504152 RALGAPA2Q2PPJ7 1873 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 BICDL2A1A5D9 508 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 H3BNC9 293 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 NRP1O14786 923 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 CETN3O15182 167 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 NR2F2P24468 414 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 PPM1AP35813 382 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 SLC11A1P49279 550 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 SPAG1Q07617 926 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 GPM6BQ13491 265 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 NAB2Q15742 525 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 ZBTB6Q15916 424 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 ZCWPW2Q504Y3 356 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 CEP135Q66GS9 1140 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 CAVIN1Q6NZI2 390 aaKnown RBP19.74■□□□□ 0.75
DDR1-252ENST00000504152 SPRED2Q7Z698 418 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 NT5DC4Q86YG4 428 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 CBWD2Q8IUF1 395 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 KLHL23Q8NBE8 558 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 CACTINQ8WUQ7 758 aaKnown RBP19.74■□□□□ 0.75
DDR1-252ENST00000504152 NELFBQ8WX92 580 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 DDX27Q96GQ7 796 aaKnown RBP19.74■□□□□ 0.75
DDR1-252ENST00000504152 UROC1Q96N76 676 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 TMEM63CQ9P1W3 806 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 PUF60Q9UHX1 559 aaKnown RBP19.74■□□□□ 0.75
DDR1-252ENST00000504152 DACH1Q9UI36 760 aa19.74■□□□□ 0.75
DDR1-252ENST00000504152 UBQLN1Q9UMX0 589 aaKnown RBP19.74■□□□□ 0.75
DDR1-252ENST00000504152 NLRC5Q86WI3 1866 aa19.73■□□□□ 0.75
DDR1-252ENST00000504152 NT5C1B-RDH14C9J2C7 533 aa19.73■□□□□ 0.75
DDR1-252ENST00000504152 LETM1O95202 739 aaPredicted RBP19.73■□□□□ 0.75
DDR1-252ENST00000504152 CYP3A5P20815 502 aa19.73■□□□□ 0.75
DDR1-252ENST00000504152 RPL9P32969 192 aaKnown RBP19.73■□□□□ 0.75
DDR1-252ENST00000504152 FKBP3Q00688 224 aaKnown RBP19.73■□□□□ 0.75
DDR1-252ENST00000504152 GRIN2CQ14957 1233 aa19.73■□□□□ 0.75
DDR1-252ENST00000504152 TMEM132DQ14C87 1099 aa19.73■□□□□ 0.75
DDR1-252ENST00000504152 JADE1Q6IE81 842 aa19.73■□□□□ 0.75
DDR1-252ENST00000504152 BEST2Q8NFU1 509 aa19.73■□□□□ 0.75
DDR1-252ENST00000504152 MFSD14AQ96MC6 490 aa19.73■□□□□ 0.75
DDR1-252ENST00000504152 FAM161BQ96MY7 647 aa19.73■□□□□ 0.75
DDR1-252ENST00000504152 C2CD2Q9Y426 696 aa19.73■□□□□ 0.75
DDR1-252ENST00000504152 CHD9Q3L8U1 2897 aa19.73■□□□□ 0.75
DDR1-252ENST00000504152 CASTOR2A6NHX0 329 aa19.72■□□□□ 0.75
DDR1-252ENST00000504152 FGF18O76093 207 aa19.72■□□□□ 0.75
DDR1-252ENST00000504152 PSMC2P35998 433 aaKnown RBP19.72■□□□□ 0.75
DDR1-252ENST00000504152 PBX3P40426 434 aa19.72■□□□□ 0.75
DDR1-252ENST00000504152 PLCB3Q01970 1234 aa19.72■□□□□ 0.75
DDR1-252ENST00000504152 CYP24A1Q07973 514 aa19.72■□□□□ 0.75
DDR1-252ENST00000504152 PAK1Q13153 545 aa19.72■□□□□ 0.75
DDR1-252ENST00000504152 NFKBIBQ15653 356 aa19.72■□□□□ 0.75
DDR1-252ENST00000504152 DCLRE1AQ6PJP8 1040 aa19.72■□□□□ 0.75
DDR1-252ENST00000504152 FOXR2Q6PJQ5 311 aa19.72■□□□□ 0.75
DDR1-252ENST00000504152 SLC39A11Q8N1S5 342 aa19.72■□□□□ 0.75
DDR1-252ENST00000504152 C18orf25Q96B23 403 aaPredicted RBP19.72■□□□□ 0.75
DDR1-252ENST00000504152 TMEM169Q96HH4 297 aa19.72■□□□□ 0.75
DDR1-252ENST00000504152 FNBP1Q96RU3 617 aa19.72■□□□□ 0.75
DDR1-252ENST00000504152 PDE11AQ9HCR9 933 aa19.72■□□□□ 0.75
DDR1-252ENST00000504152 CTNND2Q9UQB3 1225 aa19.72■□□□□ 0.75
DDR1-252ENST00000504152 MAPK13O15264 365 aa19.71■□□□□ 0.75
DDR1-252ENST00000504152 B4GALT3O60512 393 aa19.71■□□□□ 0.75
DDR1-252ENST00000504152 TADA2AO75478 443 aa19.71■□□□□ 0.75
DDR1-252ENST00000504152 PMS1P54277 932 aaKnown RBP19.71■□□□□ 0.75
DDR1-252ENST00000504152 PSMD6Q15008 389 aa19.71■□□□□ 0.75
DDR1-252ENST00000504152 CT47A1Q5JQC4 288 aaPredicted RBP19.71■□□□□ 0.75
DDR1-252ENST00000504152 SPATA1Q5VX52 437 aa19.71■□□□□ 0.75
DDR1-252ENST00000504152 IGSF21Q96ID5 467 aa19.71■□□□□ 0.75
DDR1-252ENST00000504152 PRDM12Q9H4Q4 367 aa19.71■□□□□ 0.75
DDR1-252ENST00000504152 ALG13Q9NP73 1137 aaKnown RBP19.71■□□□□ 0.75
DDR1-252ENST00000504152 STK39Q9UEW8 545 aa19.71■□□□□ 0.75
DDR1-252ENST00000504152 RWDD2AQ9UIY3 292 aa19.71■□□□□ 0.75
DDR1-252ENST00000504152 PRG3Q9Y2Y8 225 aaPredicted RBP19.71■□□□□ 0.75
DDR1-252ENST00000504152 CUL9Q8IWT3 2517 aa19.71■□□□□ 0.75
DDR1-252ENST00000504152 MYO9BQ13459 2157 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 KIAA1671Q9BY89 1806 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 TRIM49BA6NDI0 452 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 RFXAPO00287 272 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 FGFR1OPO95684 399 aaKnown RBP19.7■□□□□ 0.74
DDR1-252ENST00000504152 ITGB1P05556 798 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 NFICP08651 508 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 TNNI1P19237 187 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 CASP4P49662 377 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 CLCNKBP51801 687 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 STX17P56962 302 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 TFAMQ00059 246 aaKnown RBP19.7■□□□□ 0.74
DDR1-252ENST00000504152 UBE3AQ05086 875 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 SOX4Q06945 474 aaPredicted RBP19.7■□□□□ 0.74
DDR1-252ENST00000504152 UPP1Q16831 310 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 DUOXA2Q1HG44 320 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 USP37Q86T82 979 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 SPPL3Q8TCT6 385 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 RABGGTAQ92696 567 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 CCDC127Q96BQ5 260 aa19.7■□□□□ 0.74
DDR1-252ENST00000504152 MKNK1Q9BUB5 465 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms