RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 LTA4HP09960 611 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 CYP2C9P11712 490 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 PAFAH1B1P43034 410 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 STARP49675 285 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 SEPHS1P49903 392 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 NR5A1Q13285 461 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 PLEKHM3Q6ZWE6 761 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 SLFN12Q8IYM2 578 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 NELFBQ8WX92 580 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 PIGKQ92643 395 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 TNFRSF25Q93038 417 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 IMPG2Q9BZV3 1241 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 SENP6Q9GZR1 1112 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 TPK1Q9H3S4 243 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 KIAA1586Q9HCI6 787 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 SEMA3GQ9NS98 782 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 WDR35Q9P2L0 1181 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 FAM25AB3EWG3 89 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 FAM25CB3EWG5 89 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 FAM25GB3EWG6 89 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 SCAMP3O14828 347 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 VAMP4O75379 141 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 FSBPO95073 299 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 FAM228BP0C875 321 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 ALDH1B1P30837 517 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 HOXC13P31276 330 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 HNF4AP41235 474 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 MSH2P43246 934 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 CACNA2D1P54289 1103 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 EIF4A1P60842 406 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 STARD3Q14849 445 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 TIGD6Q17RP2 521 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 CCDC58Q4VC31 144 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 HES5Q5TA89 166 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 RSBN1Q5VWQ0 802 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 USP48Q86UV5 1035 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 CAMK1DQ8IU85 385 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 ANKFN1Q8N957 763 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 DNAAF3Q8N9W5 541 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 LEO1Q8WVC0 666 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 MED30Q96HR3 178 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 TMX3Q96JJ7 454 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 AMACRQ9UHK6 382 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 FHOD1Q9Y613 1164 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 KIF14Q15058 1648 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 H3BRJ5 948 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 H7C1Q1 480 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 KPNA4O00629 521 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 GTPBP6O43824 516 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 SLC4A2P04920 1241 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 GHRP10912 638 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 PORP16435 677 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 GAP43P17677 238 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 ATP5JP18859 108 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 COASYQ13057 564 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 BYSLQ13895 437 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 KPNB1Q14974 876 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 MLC1Q15049 377 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 MAPRE2Q15555 327 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 ZC2HC1CQ53FD0 456 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 CLEC4FQ8N1N0 589 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 CNBD1Q8NA66 436 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 EXD1Q8NHP7 514 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 TUBGCP3Q96CW5 907 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 NUDT16Q96DE0 195 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 NARS2Q96I59 477 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 C8orf76Q96K31 380 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 PIGSQ96S52 555 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 NLRC4Q9NPP4 1024 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 TRNAU1APQ9NX07 287 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 GIN1Q9NXP7 522 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 IFT80Q9P2H3 777 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 UHRF1BP1Q6BDS2 1440 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 LRRC9Q6ZRR7 1453 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 BTBD19C9JJ37 291 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 HAT1O14929 419 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 DAPK3O43293 454 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 MTX2O75431 263 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 ITGB3P05106 788 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 CARSP49589 748 aaKnown RBP6.57□□□□□ -1.36
CLCN3-204ENST00000504131 SEC13P55735 322 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 CARD18P57730 90 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 MDM2Q00987 491 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-204ENST00000504131 MCL1Q07820 350 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 GRSF1Q12849 480 aaKnown RBP eCLIP6.57□□□□□ -1.36
CLCN3-204ENST00000504131 GALNT3Q14435 633 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 SYT16Q17RD7 645 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 RGS21Q2M5E4 152 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 TDRD12Q587J7 1177 aaKnown RBP6.57□□□□□ -1.36
CLCN3-204ENST00000504131 HAUS3Q68CZ6 603 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 PDZD4Q76G19 769 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-204ENST00000504131 RD3Q7Z3Z2 195 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 DPPA2Q7Z7J5 298 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 NLGN1Q8N2Q7 840 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 TBC1D10AQ9BXI6 508 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 TIMMDC1Q9NPL8 285 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 KIAA1257Q9ULG3 409 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 SNX7Q9UNH6 387 aa6.57□□□□□ -1.36
CLCN3-204ENST00000504131 TDRKHQ9Y2W6 561 aaKnown RBP6.57□□□□□ -1.36
CLCN3-204ENST00000504131 PSMA7O14818 248 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms