RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 YWHAEP62258 255 aaKnown RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 GOLGA8FQ08AF8 430 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 GOLGA8DPQ0D2H9 430 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 KLHL30Q0D2K2 578 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 TRPC3Q13507 836 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 BFSP2Q13515 415 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 DRAP1Q14919 205 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 SPA17Q15506 151 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 ENOX2Q16206 610 aaKnown RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 SGSM1Q2NKQ1 1148 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 TDRD12Q587J7 1177 aaKnown RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 C10orf76Q5T2E6 689 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 TDRD10Q5VZ19 366 aaKnown RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 IQCEQ6IPM2 695 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 WDR59Q6PJI9 974 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 CCAR2Q8N163 923 aaKnown RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 FAM212AQ96EL1 285 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 POP1Q99575 1024 aaKnown RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 TRAIPQ9BWF2 469 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 NHEJ1Q9H9Q4 299 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 CDHR5Q9HBB8 845 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 UBE2TQ9NPD8 197 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 FHOD1Q9Y613 1164 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 EPN1Q9Y6I3 576 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 SOWAHDA6NJG2 315 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 EIF3CLB5ME19 914 aaKnown RBP8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 F8VZ95 297 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 TULP1O00294 542 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 OFD1O75665 1012 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 NDUFA10O95299 355 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 CHRNA1P02708 482 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 CXCL8P10145 99 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 P4HA1P13674 534 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 FGFR4P22455 802 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 BPIFB4P59827 614 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 TFAMQ00059 246 aaKnown RBP8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 PAK2Q13177 524 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 NCOA4Q13772 614 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 TMEM132DQ14C87 1099 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 SLC10A6Q3KNW5 377 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 ZBTB41Q5SVQ8 909 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 E4F1Q66K89 784 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 TWF2Q6IBS0 349 aaKnown RBP8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 PHLDB3Q6NSJ2 640 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 ZNF662Q6ZS27 426 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 TRAPPC11Q7Z392 1133 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 FAM228AQ86W67 206 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 PPM1KQ8N3J5 372 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 ANKLE1Q8NAG6 615 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 TAS1R2Q8TE23 839 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 TMEM40Q8WWA1 233 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 ZNF516Q92618 1163 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 ARMC5Q96C12 935 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 DEFB118Q96PH6 123 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 EIF3CQ99613 913 aaKnown RBP8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 TSGA10Q9BZW7 698 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 ITGA11Q9UKX5 1188 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 ST3GAL5Q9UNP4 418 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 PPP2R2CQ9Y2T4 447 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 NOC2LQ9Y3T9 749 aaKnown RBP8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 ADGRG1Q9Y653 693 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 ATP8B3O60423 1300 aa8.76□□□□□ -1.01
TOPBP1-202ENST00000503338 LACTBL1A8MY62 500 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 PITPNM1O00562 1244 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 AKR1B10O60218 316 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 SGPL1O95470 568 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 STAU1O95793 577 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 CD4P01730 458 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 HSPA8P11142 646 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 ATF7P17544 494 aaPredicted RBP8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 CLCN1P35523 988 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 CDK7P50613 346 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 OSTNP61366 133 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 NOP14P78316 857 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 RBP5P82980 135 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 NFX1Q12986 1120 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 BMS1Q14692 1282 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 TRIM71Q2Q1W2 868 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 SEZ6Q53EL9 994 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 FBXO47Q5MNV8 452 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 C1orf53Q5VUE5 145 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 RAD9BQ6WBX8 426 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 CDR2LQ86X02 465 aaPredicted RBP8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 TTC39CQ8N584 583 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 CEP120Q8N960 986 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 BEST2Q8NFU1 509 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 HELQQ8TDG4 1101 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 PPP1R13LQ8WUF5 828 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 SHC3Q92529 594 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 SEMA4DQ92854 862 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 KIF12Q96FN5 646 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 ZNF333Q96JL9 665 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 SNX27Q96L92 541 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 CHP1Q99653 195 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 FTHL17Q9BXU8 183 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 MTMR12Q9C0I1 747 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 CRISPLD2Q9H0B8 497 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 HAUS4Q9H6D7 363 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 VRTNQ9H8Y1 702 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 ERVK-5Q9HDB9 667 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms