RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 GOLGA8IPA6NC78 632 aa27.3■■□□□ 1.96
LSM6-202ENST00000502781 GOLGA8JA6NMD2 632 aa27.3■■□□□ 1.96
LSM6-202ENST00000502781 CLIC2O15247 247 aa27.3■■□□□ 1.96
LSM6-202ENST00000502781 CAMK4Q16566 473 aa27.3■■□□□ 1.96
LSM6-202ENST00000502781 PTPROQ16827 1216 aa27.3■■□□□ 1.96
LSM6-202ENST00000502781 DDX53Q86TM3 631 aaKnown RBP27.3■■□□□ 1.96
LSM6-202ENST00000502781 SLC9A9Q8IVB4 645 aa27.3■■□□□ 1.96
LSM6-202ENST00000502781 GPT2Q8TD30 523 aa27.3■■□□□ 1.96
LSM6-202ENST00000502781 VN1R3Q9BXE9 311 aa27.3■■□□□ 1.96
LSM6-202ENST00000502781 KIAA1586Q9HCI6 787 aa27.3■■□□□ 1.96
LSM6-202ENST00000502781 DMAC2Q9NW81 257 aa27.3■■□□□ 1.96
LSM6-202ENST00000502781 CACNG4Q9UBN1 327 aa27.3■■□□□ 1.96
LSM6-202ENST00000502781 MAPK8IP1Q9UQF2 711 aa27.3■■□□□ 1.96
LSM6-202ENST00000502781 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.3■■□□□ 1.96
LSM6-202ENST00000502781 MYO7AQ13402 2215 aa27.3■■□□□ 1.96
LSM6-202ENST00000502781 CASTOR2A6NHX0 329 aa27.29■■□□□ 1.96
LSM6-202ENST00000502781 F8W810 466 aa27.29■■□□□ 1.96
LSM6-202ENST00000502781 IGFBP4P22692 258 aa27.29■■□□□ 1.96
LSM6-202ENST00000502781 RNF168Q8IYW5 571 aaPredicted RBP27.29■■□□□ 1.96
LSM6-202ENST00000502781 UROC1Q96N76 676 aa27.29■■□□□ 1.96
LSM6-202ENST00000502781 COLEC11Q9BWP8 271 aa27.29■■□□□ 1.96
LSM6-202ENST00000502781 KIAA1468Q9P260 1216 aa27.29■■□□□ 1.96
LSM6-202ENST00000502781 PUF60Q9UHX1 559 aaKnown RBP27.29■■□□□ 1.96
LSM6-202ENST00000502781 DERAQ9Y315 318 aa27.29■■□□□ 1.96
LSM6-202ENST00000502781 IL18RAPO95256 599 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 CYP3A5P20815 502 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 BMP6P22004 513 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 PRCPP42785 496 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 SPAG1Q07617 926 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 MORC3Q14149 939 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 HSP90AA2PQ14568 343 aaPredicted RBP27.28■■□□□ 1.96
LSM6-202ENST00000502781 NFIL3Q16649 462 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 UPP1Q16831 310 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 ZCWPW2Q504Y3 356 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 CBWD2Q8IUF1 395 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 XXYLT1Q8NBI6 393 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 C18orf25Q96B23 403 aaPredicted RBP27.28■■□□□ 1.96
LSM6-202ENST00000502781 GOLGA2P5Q9HBQ8 144 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 TLR9Q9NR96 1032 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 UBQLN1Q9UMX0 589 aaKnown RBP27.28■■□□□ 1.96
LSM6-202ENST00000502781 C2CD2Q9Y426 696 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 PLXNA4Q9HCM2 1894 aa27.28■■□□□ 1.96
LSM6-202ENST00000502781 TMEM189-UBE2V1I3L0A0 370 aa27.27■■□□□ 1.96
LSM6-202ENST00000502781 FSCN2O14926 492 aa27.27■■□□□ 1.96
LSM6-202ENST00000502781 WNT7BP56706 349 aa27.27■■□□□ 1.96
LSM6-202ENST00000502781 ERVFC1P60507 584 aa27.27■■□□□ 1.96
LSM6-202ENST00000502781 MYBPC2Q14324 1141 aa27.27■■□□□ 1.96
LSM6-202ENST00000502781 JADE1Q6IE81 842 aa27.27■■□□□ 1.96
LSM6-202ENST00000502781 ADSSL1Q8N142 457 aa27.27■■□□□ 1.96
LSM6-202ENST00000502781 RABGGTAQ92696 567 aa27.27■■□□□ 1.96
LSM6-202ENST00000502781 KIF12Q96FN5 646 aa27.27■■□□□ 1.96
LSM6-202ENST00000502781 DDX27Q96GQ7 796 aaKnown RBP27.27■■□□□ 1.96
LSM6-202ENST00000502781 RBAKQ9NYW8 714 aaPredicted RBP27.27■■□□□ 1.96
LSM6-202ENST00000502781 STK39Q9UEW8 545 aa27.27■■□□□ 1.96
LSM6-202ENST00000502781 ZNF233A6NK53 670 aa27.26■■□□□ 1.95
LSM6-202ENST00000502781 RPL9P32969 192 aaKnown RBP27.26■■□□□ 1.95
LSM6-202ENST00000502781 IRS1P35568 1242 aa27.26■■□□□ 1.95
LSM6-202ENST00000502781 CYP2J2P51589 502 aa27.26■■□□□ 1.95
LSM6-202ENST00000502781 CLCNKBP51801 687 aa27.26■■□□□ 1.95
LSM6-202ENST00000502781 CD300LGQ6UXG3 332 aa27.26■■□□□ 1.95
LSM6-202ENST00000502781 FAM212AQ96EL1 285 aa27.26■■□□□ 1.95
LSM6-202ENST00000502781 TUBGCP4Q9UGJ1 667 aa27.26■■□□□ 1.95
LSM6-202ENST00000502781 ADAM28Q9UKQ2 775 aa27.26■■□□□ 1.95
LSM6-202ENST00000502781 KIF4AO95239 1232 aa27.25■■□□□ 1.95
LSM6-202ENST00000502781 NFICP08651 508 aa27.25■■□□□ 1.95
LSM6-202ENST00000502781 LRPAP1P30533 357 aa27.25■■□□□ 1.95
LSM6-202ENST00000502781 SNRNP35Q16560 246 aaKnown RBP27.25■■□□□ 1.95
LSM6-202ENST00000502781 SPATA1Q5VX52 437 aa27.25■■□□□ 1.95
LSM6-202ENST00000502781 PDE12Q6L8Q7 609 aaKnown RBP27.25■■□□□ 1.95
LSM6-202ENST00000502781 DCLRE1AQ6PJP8 1040 aa27.25■■□□□ 1.95
LSM6-202ENST00000502781 NT5DC4Q86YG4 428 aa27.25■■□□□ 1.95
LSM6-202ENST00000502781 TRIML1Q8N9V2 468 aa27.25■■□□□ 1.95
LSM6-202ENST00000502781 NUP62CLQ9H1M0 184 aa27.25■■□□□ 1.95
LSM6-202ENST00000502781 PDCD11Q14690 1871 aaKnown RBP27.25■■□□□ 1.95
LSM6-202ENST00000502781 XPOTO43592 962 aaKnown RBP27.24■■□□□ 1.95
LSM6-202ENST00000502781 CALUO43852 315 aaPredicted RBP27.24■■□□□ 1.95
LSM6-202ENST00000502781 NR3C1P04150 777 aa27.24■■□□□ 1.95
LSM6-202ENST00000502781 MCM4P33991 863 aa27.24■■□□□ 1.95
LSM6-202ENST00000502781 TMEM132DQ14C87 1099 aa27.24■■□□□ 1.95
LSM6-202ENST00000502781 TIGD5Q53EQ6 642 aa27.24■■□□□ 1.95
LSM6-202ENST00000502781 ISM2Q6H9L7 571 aa27.24■■□□□ 1.95
LSM6-202ENST00000502781 CENPPQ6IPU0 288 aa27.24■■□□□ 1.95
LSM6-202ENST00000502781 EFCAB13Q8IY85 973 aa27.24■■□□□ 1.95
LSM6-202ENST00000502781 C3orf58Q8NDZ4 430 aa27.24■■□□□ 1.95
LSM6-202ENST00000502781 ZBP1Q9H171 429 aa27.24■■□□□ 1.95
LSM6-202ENST00000502781 PODXLO00592 558 aa27.23■■□□□ 1.95
LSM6-202ENST00000502781 IGFBP6P24592 240 aaPredicted RBP27.23■■□□□ 1.95
LSM6-202ENST00000502781 EDRF1Q3B7T1 1238 aa27.23■■□□□ 1.95
LSM6-202ENST00000502781 FUT10Q6P4F1 479 aa27.23■■□□□ 1.95
LSM6-202ENST00000502781 VPS52Q8N1B4 723 aa27.23■■□□□ 1.95
LSM6-202ENST00000502781 GPR62Q9BZJ7 368 aa27.23■■□□□ 1.95
LSM6-202ENST00000502781 PDE11AQ9HCR9 933 aa27.23■■□□□ 1.95
LSM6-202ENST00000502781 ANK1P16157 1881 aa27.23■■□□□ 1.95
LSM6-202ENST00000502781 BIN1O00499 593 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 EXOC3O60645 756 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 B3GAT3O94766 335 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 SOD2P04179 222 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 CTSAP10619 480 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 CD44P16070 742 aaKnown RBP27.22■■□□□ 1.95
LSM6-202ENST00000502781 PPP1R2P41236 205 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms