RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 IL18RAPO95256 599 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 MCM4P33991 863 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 PRCPP42785 496 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 MORC3Q14149 939 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 PTPROQ16827 1216 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 TMEM173Q86WV6 379 aaPredicted RBP16.91■□□□□ 0.3
CPNE1-228ENST00000498814 SLC9A9Q8IVB4 645 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 BRSK2Q8IWQ3 736 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 SMYD4Q8IYR2 804 aaPredicted RBP16.91■□□□□ 0.3
CPNE1-228ENST00000498814 XXYLT1Q8NBI6 393 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 BCL7CQ8WUZ0 217 aaPredicted RBP16.91■□□□□ 0.3
CPNE1-228ENST00000498814 POF1BQ8WVV4 589 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 MRPL38Q96DV4 380 aaKnown RBP16.91■□□□□ 0.3
CPNE1-228ENST00000498814 TMEM169Q96HH4 297 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 DMAC2Q9NW81 257 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 PUF60Q9UHX1 559 aaKnown RBP16.91■□□□□ 0.3
CPNE1-228ENST00000498814 DERAQ9Y315 318 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 MTCH2Q9Y6C9 303 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 CASTOR2A6NHX0 329 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 ZNF233A6NK53 670 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 CALUO43852 315 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-228ENST00000498814 MBD3O95983 291 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 FOSL2P15408 326 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 CYP3A5P20815 502 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 DNAJB1P25685 340 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 CYP2J2P51589 502 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 SOX4Q06945 474 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-228ENST00000498814 CAMK1Q14012 370 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 MYBPC2Q14324 1141 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 DDX53Q86TM3 631 aaKnown RBP16.9■□□□□ 0.3
CPNE1-228ENST00000498814 ADSSL1Q8N142 457 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 TRIML1Q8N9V2 468 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 FAM212AQ96EL1 285 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 KIF12Q96FN5 646 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 DDX27Q96GQ7 796 aaKnown RBP16.9■□□□□ 0.3
CPNE1-228ENST00000498814 PAAF1Q9BRP4 392 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 NUP62CLQ9H1M0 184 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 MARCH5Q9NX47 278 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 RBAKQ9NYW8 714 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-228ENST00000498814 STK39Q9UEW8 545 aa16.9■□□□□ 0.3
CPNE1-228ENST00000498814 UBQLN1Q9UMX0 589 aaKnown RBP16.9■□□□□ 0.3
CPNE1-228ENST00000498814 PRG3Q9Y2Y8 225 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-228ENST00000498814 XPOTO43592 962 aaKnown RBP16.89■□□□□ 0.29
CPNE1-228ENST00000498814 EFEMP2O95967 443 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 NR3C1P04150 777 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 BMP6P22004 513 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 IGFBP4P22692 258 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 RPL9P32969 192 aaKnown RBP16.89■□□□□ 0.29
CPNE1-228ENST00000498814 PPP1R2P41236 205 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 SPAG1Q07617 926 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 SNRNP35Q16560 246 aaKnown RBP16.89■□□□□ 0.29
CPNE1-228ENST00000498814 NFIL3Q16649 462 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 UPP1Q16831 310 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 ZCWPW2Q504Y3 356 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 ISM2Q6H9L7 571 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 JADE1Q6IE81 842 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 CENPPQ6IPU0 288 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 DCLRE1AQ6PJP8 1040 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 NT5DC4Q86YG4 428 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 CBWD2Q8IUF1 395 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 NOC3LQ8WTT2 800 aaKnown RBP16.89■□□□□ 0.29
CPNE1-228ENST00000498814 C18orf25Q96B23 403 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-228ENST00000498814 CACNG4Q9UBN1 327 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 STXBP5LQ9Y2K9 1186 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 C2CD2Q9Y426 696 aa16.89■□□□□ 0.29
CPNE1-228ENST00000498814 TMEM189-UBE2V1I3L0A0 370 aa16.88■□□□□ 0.29
CPNE1-228ENST00000498814 BIN1O00499 593 aa16.88■□□□□ 0.29
CPNE1-228ENST00000498814 EXOC3O60645 756 aa16.88■□□□□ 0.29
CPNE1-228ENST00000498814 CLCNKBP51801 687 aa16.88■□□□□ 0.29
CPNE1-228ENST00000498814 STIM1Q13586 685 aa16.88■□□□□ 0.29
CPNE1-228ENST00000498814 TMEM132DQ14C87 1099 aa16.88■□□□□ 0.29
CPNE1-228ENST00000498814 SURF1Q15526 300 aa16.88■□□□□ 0.29
CPNE1-228ENST00000498814 SPATA1Q5VX52 437 aa16.88■□□□□ 0.29
CPNE1-228ENST00000498814 PDE12Q6L8Q7 609 aaKnown RBP16.88■□□□□ 0.29
CPNE1-228ENST00000498814 RABGGTAQ92696 567 aa16.88■□□□□ 0.29
CPNE1-228ENST00000498814 DHTKD1Q96HY7 919 aaPredicted RBP16.88■□□□□ 0.29
CPNE1-228ENST00000498814 VN1R3Q9BXE9 311 aa16.88■□□□□ 0.29
CPNE1-228ENST00000498814 GOLGA2P5Q9HBQ8 144 aa16.88■□□□□ 0.29
CPNE1-228ENST00000498814 TLR9Q9NR96 1032 aa16.88■□□□□ 0.29
CPNE1-228ENST00000498814 TUBGCP4Q9UGJ1 667 aa16.88■□□□□ 0.29
CPNE1-228ENST00000498814 ADAM28Q9UKQ2 775 aa16.88■□□□□ 0.29
CPNE1-228ENST00000498814 F8W810 466 aa16.87■□□□□ 0.29
CPNE1-228ENST00000498814 FSCN2O14926 492 aa16.87■□□□□ 0.29
CPNE1-228ENST00000498814 TADA2AO75478 443 aa16.87■□□□□ 0.29
CPNE1-228ENST00000498814 KIF4AO95239 1232 aa16.87■□□□□ 0.29
CPNE1-228ENST00000498814 NFICP08651 508 aa16.87■□□□□ 0.29
CPNE1-228ENST00000498814 RPL13P26373 211 aaKnown RBP16.87■□□□□ 0.29
CPNE1-228ENST00000498814 LRPAP1P30533 357 aa16.87■□□□□ 0.29
CPNE1-228ENST00000498814 WNT7BP56706 349 aa16.87■□□□□ 0.29
CPNE1-228ENST00000498814 ERVFC1P60507 584 aa16.87■□□□□ 0.29
CPNE1-228ENST00000498814 EDRF1Q3B7T1 1238 aa16.87■□□□□ 0.29
CPNE1-228ENST00000498814 EFCAB13Q8IY85 973 aa16.87■□□□□ 0.29
CPNE1-228ENST00000498814 RNF168Q8IYW5 571 aaPredicted RBP16.87■□□□□ 0.29
CPNE1-228ENST00000498814 RDH13Q8NBN7 331 aa16.87■□□□□ 0.29
CPNE1-228ENST00000498814 BEST2Q8NFU1 509 aa16.87■□□□□ 0.29
CPNE1-228ENST00000498814 MFSD14AQ96MC6 490 aa16.87■□□□□ 0.29
CPNE1-228ENST00000498814 PDE11AQ9HCR9 933 aa16.87■□□□□ 0.29
CPNE1-228ENST00000498814 PPP1R3GB7ZBB8 358 aa16.86■□□□□ 0.29
CPNE1-228ENST00000498814 PODXLO00592 558 aa16.86■□□□□ 0.29
CPNE1-228ENST00000498814 PSMA7O14818 248 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms