RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 VPS52Q8N1B4 723 aa18.23■□□□□ 0.51
PRKCB-210ENST00000498739 GPD1LQ8N335 351 aa18.23■□□□□ 0.51
PRKCB-210ENST00000498739 HASPINQ8TF76 798 aa18.23■□□□□ 0.51
PRKCB-210ENST00000498739 C18orf25Q96B23 403 aaPredicted RBP18.23■□□□□ 0.51
PRKCB-210ENST00000498739 UROC1Q96N76 676 aa18.23■□□□□ 0.51
PRKCB-210ENST00000498739 ADAM28Q9UKQ2 775 aa18.23■□□□□ 0.51
PRKCB-210ENST00000498739 PCDHA5Q9Y5H7 936 aa18.23■□□□□ 0.51
PRKCB-210ENST00000498739 FSCN2O14926 492 aa18.22■□□□□ 0.51
PRKCB-210ENST00000498739 KIAA0391O15091 583 aaKnown RBP18.22■□□□□ 0.51
PRKCB-210ENST00000498739 EXTL3O43909 919 aa18.22■□□□□ 0.51
PRKCB-210ENST00000498739 TADA2AO75478 443 aa18.22■□□□□ 0.51
PRKCB-210ENST00000498739 KIF20AO95235 890 aa18.22■□□□□ 0.51
PRKCB-210ENST00000498739 KIF4AO95239 1232 aa18.22■□□□□ 0.51
PRKCB-210ENST00000498739 ADRB2P07550 413 aa18.22■□□□□ 0.51
PRKCB-210ENST00000498739 CLCNKBP51801 687 aa18.22■□□□□ 0.51
PRKCB-210ENST00000498739 SNRPFP62306 86 aaKnown RBP18.22■□□□□ 0.51
PRKCB-210ENST00000498739 SKIV2LQ15477 1246 aaKnown RBP18.22■□□□□ 0.51
PRKCB-210ENST00000498739 TCEAL5Q5H9L2 206 aa18.22■□□□□ 0.51
PRKCB-210ENST00000498739 JADE1Q6IE81 842 aa18.22■□□□□ 0.51
PRKCB-210ENST00000498739 GSDMAQ96QA5 445 aa18.22■□□□□ 0.51
PRKCB-210ENST00000498739 VN1R3Q9BXE9 311 aa18.22■□□□□ 0.51
PRKCB-210ENST00000498739 RBAKQ9NYW8 714 aaPredicted RBP18.22■□□□□ 0.51
PRKCB-210ENST00000498739 HSPBP1Q9NZL4 362 aa18.22■□□□□ 0.51
PRKCB-210ENST00000498739 TUBGCP4Q9UGJ1 667 aa18.22■□□□□ 0.51
PRKCB-210ENST00000498739 MAPK8IP1Q9UQF2 711 aa18.22■□□□□ 0.51
PRKCB-210ENST00000498739 CYP2J2P51589 502 aa18.21■□□□□ 0.51
PRKCB-210ENST00000498739 SMC1AQ14683 1233 aaKnown RBP18.21■□□□□ 0.51
PRKCB-210ENST00000498739 BMS1Q14692 1282 aaKnown RBP18.21■□□□□ 0.51
PRKCB-210ENST00000498739 PDE12Q6L8Q7 609 aaKnown RBP18.21■□□□□ 0.51
PRKCB-210ENST00000498739 FUT10Q6P4F1 479 aa18.21■□□□□ 0.51
PRKCB-210ENST00000498739 ADGRD2Q7Z7M1 963 aa18.21■□□□□ 0.51
PRKCB-210ENST00000498739 BRSK2Q8IWQ3 736 aa18.21■□□□□ 0.51
PRKCB-210ENST00000498739 SMYD4Q8IYR2 804 aaPredicted RBP18.21■□□□□ 0.51
PRKCB-210ENST00000498739 PPP2R3CQ969Q6 453 aa18.21■□□□□ 0.51
PRKCB-210ENST00000498739 ZBP1Q9H171 429 aa18.21■□□□□ 0.51
PRKCB-210ENST00000498739 ASB7Q9H672 318 aa18.21■□□□□ 0.51
PRKCB-210ENST00000498739 NGRNQ9NPE2 291 aaKnown RBP18.21■□□□□ 0.51
PRKCB-210ENST00000498739 LMBRD1Q9NUN5 540 aa18.21■□□□□ 0.51
PRKCB-210ENST00000498739 CGNQ9P2M7 1197 aaKnown RBP18.21■□□□□ 0.51
PRKCB-210ENST00000498739 STK39Q9UEW8 545 aa18.21■□□□□ 0.51
PRKCB-210ENST00000498739 UBQLN1Q9UMX0 589 aaKnown RBP18.21■□□□□ 0.51
PRKCB-210ENST00000498739 GOLGA6L22H0YM25 854 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 PODXLO00592 558 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 XPOTO43592 962 aaKnown RBP18.2■□□□□ 0.5
PRKCB-210ENST00000498739 B3GAT3O94766 335 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 IL18RAPO95256 599 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 SOD2P04179 222 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 NFICP08651 508 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 POU5F1Q01860 360 aaKnown RBP18.2■□□□□ 0.5
PRKCB-210ENST00000498739 TMEM132DQ14C87 1099 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 UPP1Q16831 310 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 DCLRE1AQ6PJP8 1040 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 RBM23Q86U06 439 aaKnown RBP18.2■□□□□ 0.5
PRKCB-210ENST00000498739 SPATA20Q8TB22 786 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 GOLGA5Q8TBA6 731 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 AUTS2Q8WXX7 1259 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 DDX27Q96GQ7 796 aaKnown RBP18.2■□□□□ 0.5
PRKCB-210ENST00000498739 TSPAN18Q96SJ8 248 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 HERC2P3Q9BVR0 1158 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 KCTD10Q9H3F6 313 aa18.2■□□□□ 0.5
PRKCB-210ENST00000498739 SF3B1O75533 1304 aaKnown RBP eCLIP18.2■□□□□ 0.53e-6■■■■■ 63.7
PRKCB-210ENST00000498739 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.19■□□□□ 0.5
PRKCB-210ENST00000498739 ZNF233A6NK53 670 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 HIDE1A8MVS5 230 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 TMEM189-UBE2V1I3L0A0 370 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 PDXKO00764 312 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 CXCL14O95715 111 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 CTSAP10619 480 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 CYP3A5P20815 502 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 WNT7BP56706 349 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 ZBTB6Q15916 424 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 CAMK4Q16566 473 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 ZNF658Q5TYW1 1059 aaPredicted RBP18.19■□□□□ 0.5
PRKCB-210ENST00000498739 ISM2Q6H9L7 571 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 TAS1R1Q7RTX1 841 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 CBWD2Q8IUF1 395 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 C12orf56Q8IXR9 622 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 TMEM130Q8N3G9 435 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 GUF1Q8N442 669 aaKnown RBP18.19■□□□□ 0.5
PRKCB-210ENST00000498739 XXYLT1Q8NBI6 393 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 RDH13Q8NBN7 331 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 BEST2Q8NFU1 509 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 GPR62Q9BZJ7 368 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 IGFLR1Q9H665 355 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 KIAA1586Q9HCI6 787 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 DERAQ9Y315 318 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 ATG2AQ2TAZ0 1938 aa18.19■□□□□ 0.5
PRKCB-210ENST00000498739 CITO14578 2027 aa18.18■□□□□ 0.5
PRKCB-210ENST00000498739 C2CD2LO14523 706 aa18.18■□□□□ 0.5
PRKCB-210ENST00000498739 CALUO43852 315 aaPredicted RBP18.18■□□□□ 0.5
PRKCB-210ENST00000498739 URODP06132 367 aa18.18■□□□□ 0.5
PRKCB-210ENST00000498739 IGFBP6P24592 240 aaPredicted RBP18.18■□□□□ 0.5
PRKCB-210ENST00000498739 RPL9P32969 192 aaKnown RBP18.18■□□□□ 0.5
PRKCB-210ENST00000498739 NRIP1P48552 1158 aa18.18■□□□□ 0.5
PRKCB-210ENST00000498739 GUCY2FP51841 1108 aa18.18■□□□□ 0.5
PRKCB-210ENST00000498739 HYAL1Q12794 435 aa18.18■□□□□ 0.5
PRKCB-210ENST00000498739 SPATA1Q5VX52 437 aa18.18■□□□□ 0.5
PRKCB-210ENST00000498739 RNF168Q8IYW5 571 aaPredicted RBP18.18■□□□□ 0.5
PRKCB-210ENST00000498739 MRPL43Q8N983 215 aaKnown RBP18.18■□□□□ 0.5
PRKCB-210ENST00000498739 C3orf58Q8NDZ4 430 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms