RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 TMTC1Q8IUR5 882 aa9.66□□□□□ -0.86
SNX13-212ENST00000498463 COLGALT2Q8IYK4 626 aa9.66□□□□□ -0.86
SNX13-212ENST00000498463 FAM26EQ8N5C1 309 aa9.66□□□□□ -0.86
SNX13-212ENST00000498463 OR6B3Q8NGW1 331 aa9.66□□□□□ -0.86
SNX13-212ENST00000498463 DDX11Q96FC9 970 aa9.66□□□□□ -0.86
SNX13-212ENST00000498463 UHRF1Q96T88 793 aaPredicted RBP9.66□□□□□ -0.86
SNX13-212ENST00000498463 LDAHQ9H6V9 325 aa9.66□□□□□ -0.86
SNX13-212ENST00000498463 BCO1Q9HAY6 547 aa9.66□□□□□ -0.86
SNX13-212ENST00000498463 PRDM7Q9NQW5 492 aa9.66□□□□□ -0.86
SNX13-212ENST00000498463 TPSG1Q9NRR2 321 aa9.66□□□□□ -0.86
SNX13-212ENST00000498463 GGA3Q9NZ52 723 aa9.66□□□□□ -0.86
SNX13-212ENST00000498463 ARHGAP20Q9P2F6 1191 aa9.66□□□□□ -0.86
SNX13-212ENST00000498463 CCDC39Q9UFE4 941 aa9.66□□□□□ -0.86
SNX13-212ENST00000498463 F2RL2O00254 374 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 PODXLO00592 558 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 SDHBP21912 280 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 ATP8B2P98198 1209 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 PDE1CQ14123 709 aaPredicted RBP9.65□□□□□ -0.86
SNX13-212ENST00000498463 CCDC93Q567U6 631 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 EMC10Q5UCC4 262 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 VPS53Q5VIR6 699 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 GRAMD4Q6IC98 578 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 LIN54Q6MZP7 749 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 CNKSR3Q6P9H4 555 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 FBXO38Q6PIJ6 1188 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 CATSPERGQ6ZRH7 1159 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 TBC1D1Q86TI0 1168 aaPredicted RBP9.65□□□□□ -0.86
SNX13-212ENST00000498463 WFDC3Q8IUB2 231 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 ADGRG2Q8IZP9 1017 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 CYP2W1Q8TAV3 490 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 ASB12Q8WXK4 309 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 WDR92Q96MX6 357 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 TACO1Q9BSH4 297 aaKnown RBP9.65□□□□□ -0.86
SNX13-212ENST00000498463 FAM167BQ9BTA0 163 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 C1orf43Q9BWL3 253 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 DLL4Q9NR61 685 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 TM7SF3Q9NS93 570 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 CLIC5Q9NZA1 410 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 SRRDQ9UH36 339 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 HDAC9Q9UKV0 1011 aa9.65□□□□□ -0.86
SNX13-212ENST00000498463 ITIH6Q6UXX5 1313 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 CLCA1A8K7I4 914 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 GPR32O75388 356 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 FSBPO95073 299 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 IL18BPO95998 194 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 MT-ND5P03915 603 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 IFIT1P09914 478 aaKnown RBP9.64□□□□□ -0.87
SNX13-212ENST00000498463 GAAP10253 952 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 CKMT1AP12532 417 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 DDCP20711 480 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 GLRBP48167 497 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 FOXO4P98177 505 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 EXOSC9Q06265 439 aaKnown RBP9.64□□□□□ -0.87
SNX13-212ENST00000498463 MAN2A1Q16706 1144 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 C19orf54Q5BKX5 351 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 ZNF783Q6ZMS7 281 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 SPRED2Q7Z698 418 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 LRRTM4Q86VH4 590 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 UNC5BQ8IZJ1 945 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 BCL6BQ8N143 479 aaPredicted RBP9.64□□□□□ -0.87
SNX13-212ENST00000498463 LILRA2Q8N149 483 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 ESX1Q8N693 406 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 PIK3C3Q8NEB9 887 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 OR7D4Q8NG98 312 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 FAM71BQ8TC56 605 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 IPO4Q8TEX9 1081 aaKnown RBP9.64□□□□□ -0.87
SNX13-212ENST00000498463 EIF2AQ9BY44 585 aaKnown RBP9.64□□□□□ -0.87
SNX13-212ENST00000498463 SMURF2Q9HAU4 748 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 ALG13Q9NP73 1137 aaKnown RBP9.64□□□□□ -0.87
SNX13-212ENST00000498463 LANCL2Q9NS86 450 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 C19orf73Q9NVV2 129 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 SAE1Q9UBE0 346 aaPredicted RBP9.64□□□□□ -0.87
SNX13-212ENST00000498463 TRPS1Q9UHF7 1281 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 POLG2Q9UHN1 485 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 MED16Q9Y2X0 877 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 TMEM98Q9Y2Y6 226 aa9.64□□□□□ -0.87
SNX13-212ENST00000498463 KAT6BQ8WYB5 2073 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 FAM234BA2RU67 622 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 BTN3A1O00481 513 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 TCERG1O14776 1098 aaKnown RBP9.63□□□□□ -0.87
SNX13-212ENST00000498463 BAIAP3O94812 1187 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 POLBP06746 335 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 MYL4P12829 197 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 HNRNPLP14866 589 aaKnown RBP eCLIP9.63□□□□□ -0.87
SNX13-212ENST00000498463 HDCP19113 662 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 CNTFP26441 200 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 CREMQ03060 361 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 SLC13A2Q13183 592 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 MTM1Q13496 603 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 PTK2BQ14289 1009 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 TIGD6Q17RP2 521 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 PLEKHN1Q494U1 663 aaPredicted RBP9.63□□□□□ -0.87
SNX13-212ENST00000498463 ZNF574Q6ZN55 896 aaPredicted RBP9.63□□□□□ -0.87
SNX13-212ENST00000498463 ZC3H18Q86VM9 953 aaKnown RBP9.63□□□□□ -0.87
SNX13-212ENST00000498463 MICU3Q86XE3 530 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 TNPO1Q92973 898 aaKnown RBP9.63□□□□□ -0.87
SNX13-212ENST00000498463 ERP27Q96DN0 273 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 GDF15Q99988 308 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 UBN1Q9NPG3 1134 aa9.63□□□□□ -0.87
SNX13-212ENST00000498463 ZFP69BQ9UJL9 534 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms